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系统评价和元分析地表水水源性哺乳动物病毒和噬菌体的衰减率。

Systematic review and meta-analysis of decay rates of waterborne mammalian viruses and coliphages in surface waters.

机构信息

Department of Civil and Environmental Engineering, Stanford University, Stanford, CA, 94305, USA.

Department of Civil and Urban Engineering, Tandon School of Engineering, New York University, Brooklyn, NY, 11201, USA; College of Global Public Health, New York University, New York, NY, 10012, USA.

出版信息

Water Res. 2019 Nov 1;164:114898. doi: 10.1016/j.watres.2019.114898. Epub 2019 Jul 23.

Abstract

Surface waters are essential natural resources. They are also receiving waters for a variety of anthropogenic waste streams that carry a myriad of pollutants including pathogens. Watershed and fate and transport models can help inform the spatial and temporal extent of microbial pollution from point and non-point sources and thus provide useful information for managing surface waters. Viruses are particularly important water-related pathogens because they often have a low infectious dose, which means that ingestion of even a small volume of water containing a low concentration of virions has the potential to cause disease. We conducted a systematic review of the literature, following best practices, to gather decay rate constants (k) of mammalian waterborne viruses (enteroviruses, adenoviruses, noroviruses, astroviruses, rotaviruses, and hepatitis A viruses) and coliphages in raw surface waters to aid in the parameterization of virus fate and transport models. We identified 562 k values from the literature, with the largest number identified for enteroviruses and coliphages and the smallest for astrovirus, hepatitis A virus, and norovirus. Average k values for each virus varied from 0.07 to 0.9 per day, in order from smallest to largest: Norwalk virus (i.e., noroviruses) < Human astrovirus < Mastadenovirus (i.e., adenoviruses) < Hepatovirus A (i.e., hepatitis A viruses) < Rotavirus A < coliphages < Enterovirus. A meta-analysis investigated how k varied among viruses for experiments conducted with different virus serotypes or species at different temperatures, salinities, and sunlight exposures, and for experiments that enumerated viruses using different methodologies. Virus species or serotype did not affect k among decay experiments. k values were generally larger for experiments conducted at higher temperatures, in sunlight, and in estuarine waters, and enumerated using culture methods. k values were statistically different between virus types with Norwalk virus, Hepatovirus A, and Mastadenovirus having smaller k values than other viruses, controlling for experimental condition and enumeration method. While F+ coliphage k values were similar to those of Enterovirus, Human astrovirus, and Rotavirus A, they were different from those of the other mammalian viruses. This compilation of coliphage and mammalian virus k values provides essential information for researchers and risk assessors who model virus fate and transport in surface waters and identifies avenues for future research to fill knowledge gaps.

摘要

地表水是至关重要的自然资源。它们也是各种人为废水的受纳水体,这些废水中携带着包括病原体在内的无数污染物。流域、归宿和输移模型可以帮助了解从点源和非点源微生物污染的时空范围,从而为管理地表水提供有用的信息。病毒是特别重要的与水有关的病原体,因为它们通常具有较低的感染剂量,这意味着即使摄入含有低浓度病毒的少量水,也有可能导致疾病。我们按照最佳实践进行了系统的文献综述,以收集原地表水中华生哺乳动物病毒(肠道病毒、腺病毒、诺如病毒、星状病毒、轮状病毒和甲型肝炎病毒)和噬菌体的衰减率常数 (k),以帮助病毒归宿和输移模型的参数化。我们从文献中确定了 562 个 k 值,其中数量最多的是肠道病毒和噬菌体,数量最少的是星状病毒、甲型肝炎病毒和诺如病毒。每种病毒的平均 k 值从每天 0.07 到 0.9 不等,从小到大依次为:诺如病毒(即诺如病毒)<人星状病毒<腺病毒<甲型肝炎病毒<轮状病毒 A<噬菌体<肠道病毒。一项荟萃分析研究了 k 值如何因不同病毒血清型或种属、不同温度、盐度和阳光暴露条件下的实验,以及使用不同方法对病毒进行计数的实验而在病毒之间发生变化。病毒种属或血清型并不影响衰减实验中的 k 值。在较高温度、阳光和河口水中进行的实验,以及使用培养方法对病毒进行计数的实验,k 值通常较大。控制实验条件和计数方法后,诺如病毒、甲型肝炎病毒和腺病毒的 k 值小于其他病毒。噬菌体 F+的 k 值与肠道病毒、人星状病毒和轮状病毒 A 的 k 值相似,但与其他哺乳动物病毒的 k 值不同。本汇编提供了有关在地表水中国家建模病毒归宿和输移的研究人员和风险评估人员的基本信息,并确定了未来研究的途径,以填补知识空白。

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