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本文引用的文献

1
Detachment of the RNA degradosome from the inner membrane of Escherichia coli results in a global slowdown of mRNA degradation, proteolysis of RNase E and increased turnover of ribosome-free transcripts.RNA 降解体从大肠杆菌内膜上的脱离导致 mRNA 降解的全面减缓,RNase E 的蛋白水解和核糖体游离转录物周转率的增加。
Mol Microbiol. 2019 Jun;111(6):1715-1731. doi: 10.1111/mmi.14248. Epub 2019 Apr 6.
2
Obstacles to Scanning by RNase E Govern Bacterial mRNA Lifetimes by Hindering Access to Distal Cleavage Sites.RNase E 阻碍对细菌 mRNA 寿命的扫描,通过阻碍对远端切割位点的接近。
Mol Cell. 2019 Apr 18;74(2):284-295.e5. doi: 10.1016/j.molcel.2019.01.044. Epub 2019 Mar 6.
3
Pneumococcal RNase R globally impacts protein synthesis by regulating the amount of actively translating ribosomes.肺炎球菌核糖核酸酶 R 通过调节活跃翻译核糖体的数量来全局影响蛋白质合成。
RNA Biol. 2019 Feb;16(2):211-219. doi: 10.1080/15476286.2018.1564616. Epub 2019 Jan 13.
4
In Vitro Study of the Major Bacillus subtilis Ribonucleases Y and J.枯草芽孢杆菌主要核糖核酸酶Y和J的体外研究
Methods Enzymol. 2018;612:343-359. doi: 10.1016/bs.mie.2018.08.004. Epub 2018 Aug 31.
5
In vivo 3'-to-5' exoribonuclease targetomes of .体内 3'-到-5' 外切核糖核酸酶靶标组学。
Proc Natl Acad Sci U S A. 2018 Nov 13;115(46):11814-11819. doi: 10.1073/pnas.1809663115. Epub 2018 Oct 31.
6
A Subset of Exoribonucleases Serve as Degradative Enzymes for pGpG in c-di-GMP Signaling.一组 Exoribonucleases 可作为 c-di-GMP 信号通路中 pGpG 的降解酶。
J Bacteriol. 2018 Nov 26;200(24). doi: 10.1128/JB.00300-18. Print 2018 Dec 15.
7
Characterization of Lhr-Core DNA helicase and manganese- dependent DNA nuclease components of a bacterial gene cluster encoding nucleic acid repair enzymes.细菌基因簇编码核酸修复酶中 Lhr-Core DNA 解旋酶和锰依赖性 DNA 核酸酶成分的特性。
J Biol Chem. 2018 Nov 9;293(45):17491-17504. doi: 10.1074/jbc.RA118.005296. Epub 2018 Sep 17.
8
Autoregulation of bacterial gene expression: lessons from the MazEF toxin-antitoxin system.细菌基因表达的自动调节:来自 MazEF 毒素-抗毒素系统的启示。
Curr Genet. 2019 Feb;65(1):133-138. doi: 10.1007/s00294-018-0879-8. Epub 2018 Aug 21.
9
Elevated Levels of Era GTPase Improve Growth, 16S rRNA Processing, and 70S Ribosome Assembly of Escherichia coli Lacking Highly Conserved Multifunctional YbeY Endoribonuclease.Era GTPase 水平升高可改善缺乏高度保守多功能 YbeY 内切核酸酶的大肠杆菌的生长、16S rRNA 加工和 70S 核糖体组装。
J Bacteriol. 2018 Aug 10;200(17). doi: 10.1128/JB.00278-18. Print 2018 Sep 1.
10
The essential nature of YqfG, a YbeY homologue required for 3' maturation of Bacillus subtilis 16S ribosomal RNA is suppressed by deletion of RNase R.YqfG 的本质是一种 YbeY 同源物,对于枯草芽孢杆菌 16S rRNA 的 3' 成熟是必需的,其功能可被 RNase R 的缺失所抑制。
Nucleic Acids Res. 2018 Sep 19;46(16):8605-8615. doi: 10.1093/nar/gky488.

细菌核糖核酸酶及其在 RNA 代谢中的作用。

Bacterial ribonucleases and their roles in RNA metabolism.

机构信息

Department of Pharmacological Sciences, Icahn School of Medicine at Mount Sinai , New York , NY , USA.

Department of Biochemistry and Molecular Biology, University of Miami Miller School of Medicine , Miami , FL , USA.

出版信息

Crit Rev Biochem Mol Biol. 2019 Jun;54(3):242-300. doi: 10.1080/10409238.2019.1651816.

DOI:10.1080/10409238.2019.1651816
PMID:31464530
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6776250/
Abstract

Ribonucleases (RNases) are mediators in most reactions of RNA metabolism. In recent years, there has been a surge of new information about RNases and the roles they play in cell physiology. In this review, a detailed description of bacterial RNases is presented, focusing primarily on those from and , the model Gram-negative and Gram-positive organisms, from which most of our current knowledge has been derived. Information from other organisms is also included, where relevant. In an extensive catalog of the known bacterial RNases, their structure, mechanism of action, physiological roles, genetics, and possible regulation are described. The RNase complement of and is compared, emphasizing the similarities, but especially the differences, between the two. Included are figures showing the three major RNA metabolic pathways in and and highlighting specific steps in each of the pathways catalyzed by the different RNases. This compilation of the currently available knowledge about bacterial RNases will be a useful tool for workers in the RNA field and for others interested in learning about this area.

摘要

核糖核酸酶(RNases)是大多数 RNA 代谢反应的介质。近年来,关于 RNases 及其在细胞生理学中所扮演的角色的新信息大量涌现。在这篇综述中,详细描述了细菌 RNases,主要聚焦于革兰氏阴性和革兰氏阳性模式生物 和 中的那些 RNases,我们目前的大部分相关知识都来源于这两种生物。在适当的情况下,也包含了来自其他生物体的信息。在对已知细菌 RNases 的广泛目录中,描述了它们的结构、作用机制、生理作用、遗传学和可能的调控。比较了 和 的 RNase 组成,强调了两者之间的相似之处,但特别是差异。还包括显示 和 中三种主要 RNA 代谢途径的图片,并突出显示每条途径中由不同 RNases 催化的特定步骤。关于细菌 RNases 的现有知识的这种汇编将成为 RNA 领域工作者和其他有兴趣了解该领域的人的有用工具。