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sp. nov.,从冰芯中分离得到。

sp. nov., isolated from an ice core.

机构信息

University of Chinese Academy of Sciences, Beijing 100101, PR China.

Key Laboratory of Alpine Ecology, Chinese Academy of Sciences, Beijing 100101, PR China.

出版信息

Int J Syst Evol Microbiol. 2019 Nov;69(11):3519-3523. doi: 10.1099/ijsem.0.003653.

DOI:10.1099/ijsem.0.003653
PMID:31483241
Abstract

A Gram-stain-positive, rod-shaped and motile bacterium with lateral flagellum, designated T3246-1, was isolated from an ice core, which was drilled from Hariqin Glacier on the Tibetan Plateau, PR China. It grew optimally at 20 °C, pH 7-8 and in the presence of 3 % (w/v) NaCl. The major fatty acid of strain T3246-1 was anteiso-C. Major polar lipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylinositol. MK-8 was the dominant isoprenoid quinone. The whole-cell sugars were rhamnose, xylose and mannose. The major cell-wall peptidoglycan was lysine. The genomic DNA G+C content of the strain was 71.4 mol%. Results of phylogenetic analysis based on 16S rRNA gene sequences showed that strain T3246-1 formed a lineage within the genus and was closely related to YIM 93306 with 95.99 % similarity. The average nucleotide identity value between strain T3246-1 and YIM 93306 was 76.65 %. Based on phenotypic and chemotaxonomic characteristics, strain T3246-1 was considered to represent a novel species of the genus , for which the name sp. nov. is proposed. The type strain is T3246-1 (=CGMCC 1.13535=JCM 32923).

摘要

一株革兰氏阳性、杆状、具有侧鞭毛、可运动的细菌,命名为 T3246-1,是从中国青藏高原哈里钦冰川的冰芯中分离得到的。它在 20°C、pH7-8 和 3%(w/v)NaCl 的条件下生长最佳。菌株 T3246-1 的主要脂肪酸为anteiso-C。主要极性脂为双磷脂酰甘油、磷脂酰甘油和磷脂酰肌醇。MK-8 是主要的异戊烯醌。全细胞糖为鼠李糖、木糖和甘露糖。主要细胞壁肽聚糖为赖氨酸。该菌株的基因组 DNA G+C 含量为 71.4 mol%。基于 16S rRNA 基因序列的系统发育分析结果表明,菌株 T3246-1 形成了一个与属内其他种密切相关的分支,与 YIM 93306 的相似性为 95.99%。菌株 T3246-1 与 YIM 93306 之间的平均核苷酸同一性值为 76.65%。基于表型和化学分类特征,菌株 T3246-1 被认为代表了属的一个新种,因此提议使用 sp. nov. 来命名这个新种。该模式菌株是 T3246-1(=CGMCC 1.13535=JCM 32923)。

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