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非洲爪蟾和热带爪蟾成体α-珠蛋白基因及其5'侧翼区域之间的一级结构和进化关系。

Primary structure and evolutionary relationship between the adult alpha-globin genes and their 5'-flanking regions of Xenopus laevis and Xenopus tropicalis.

作者信息

Stalder J, Wirthmüller U, Beck J, Gruber A, Meyerhof W, Knöchel W, Weber R

机构信息

Zoologisches Institut, Abteilung für Zell- und Entwicklungsbiologie, Bern, Switzerland.

出版信息

J Mol Evol. 1988;28(1-2):64-71. doi: 10.1007/BF02143498.

DOI:10.1007/BF02143498
PMID:3148743
Abstract

To investigate the evolution of globin genes in the genus Xenopus, we have determined the primary structure of the related adult alpha I- and alpha II-globin genes of X. laevis and of the adult alpha-globin gene of X. tropicalis, including their 5'-flanking regions. All three genes are comprised of three exons and two introns at homologous positions. The exons are highly conserved and code for 141 amino acids. By contrast, the corresponding introns vary in length and show considerable divergence. Comparison of 900 bp of the 5'-flanking region revealed that the X. tropicalis gene contains a conserved proximal 310-bp promoter sequence, comprised of the canonical TATA and CCAAT motifs at homologous positions, and five conserved elements in the same order and at similar positions as previously shown for the corresponding genes of X. laevis. We therefore conclude that these conserved upstream elements may represent regulatory sequences for cell-specific regulation of the adult Xenopus globin genes.

摘要

为了研究非洲爪蟾属中珠蛋白基因的进化,我们测定了非洲爪蟾相关的成年αI -和αII -珠蛋白基因以及热带爪蟾成年α -珠蛋白基因的一级结构,包括它们的5'侧翼区域。所有这三个基因都由三个外显子和两个位于同源位置的内含子组成。外显子高度保守,编码141个氨基酸。相比之下,相应的内含子长度不同且显示出相当大的差异。对900 bp的5'侧翼区域进行比较发现,热带爪蟾基因包含一个保守的近端310 bp启动子序列,该序列在同源位置由典型的TATA和CCAAT基序组成,并且有五个保守元件,其顺序和位置与先前在非洲爪蟾相应基因中显示的相同。因此,我们得出结论,这些保守的上游元件可能代表成年非洲爪蟾珠蛋白基因细胞特异性调控的调控序列。

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Primary structure and evolutionary relationship between the adult alpha-globin genes and their 5'-flanking regions of Xenopus laevis and Xenopus tropicalis.非洲爪蟾和热带爪蟾成体α-珠蛋白基因及其5'侧翼区域之间的一级结构和进化关系。
J Mol Evol. 1988;28(1-2):64-71. doi: 10.1007/BF02143498.
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Linkage of adult alpha- and beta-globin genes in X. laevis and gene duplication by tetraploidization.非洲爪蟾中成年α-珠蛋白基因和β-珠蛋白基因的连锁以及四倍体化导致的基因复制。
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本文引用的文献

1
Linkage of adult alpha- and beta-globin genes in X. laevis and gene duplication by tetraploidization.非洲爪蟾中成年α-珠蛋白基因和β-珠蛋白基因的连锁以及四倍体化导致的基因复制。
Cell. 1980 Sep;21(2):555-64. doi: 10.1016/0092-8674(80)90493-6.
2
A comparison of the karyotype, constitutive heterochromatin, and nucleolar organizer regions of the new tetraploid species Xenopus epitropicalis Fischberg and Picard with those of Xenopus tropicalis Gray (Anura, Pipidae).新四倍体物种热带爪蟾(Xenopus epitropicalis Fischberg和Picard)与热带爪蟾(Xenopus tropicalis Gray)(无尾目,负子蟾科)的核型、组成型异染色质和核仁组织区的比较
Cytogenet Cell Genet. 1982;34(1-2):149-57. doi: 10.1159/000131803.
3
The Xenopus laevis globin gene family: chromosomal arrangement and gene structure.
非洲爪蟾珠蛋白基因家族:染色体排列与基因结构
Cell. 1983 Jan;32(1):45-53. doi: 10.1016/0092-8674(83)90495-6.
4
Replication and expression of Xenopus laevis globin genes injected into fertilized Xenopus eggs.注射到非洲爪蟾受精卵中的非洲爪蟾珠蛋白基因的复制与表达。
Proc Natl Acad Sci U S A. 1983 Oct;80(20):6197-201. doi: 10.1073/pnas.80.20.6197.
5
Cloning and complete nucleotide sequence of human 5'-alpha-globin gene.人类5'-α-珠蛋白基因的克隆及完整核苷酸序列
Proc Natl Acad Sci U S A. 1980 Dec;77(12):7054-8. doi: 10.1073/pnas.77.12.7054.
6
Isolation of two closely related vitellogenin genes, including their flanking regions, from a Xenopus laevis gene library.从非洲爪蟾基因文库中分离出两个密切相关的卵黄蛋白原基因,包括它们的侧翼区域。
Proc Natl Acad Sci U S A. 1980 Mar;77(3):1437-41. doi: 10.1073/pnas.77.3.1437.
7
Isolation and characterization of calmodulin genes from Xenopus laevis.非洲爪蟾钙调蛋白基因的分离与鉴定
Mol Cell Biol. 1984 Mar;4(3):507-13. doi: 10.1128/mcb.4.3.507-513.1984.
8
Boundaries of gene conversion within the duplicated human alpha-globin genes. Concerted evolution by segmental recombination.人类α-珠蛋白基因重复序列内基因转换的边界。通过片段重组实现协同进化。
J Biol Chem. 1983 Dec 25;258(24):15245-54.
9
The nucleotide sequence of the adult chicken alpha-globin genes.成年鸡α-珠蛋白基因的核苷酸序列。
J Biol Chem. 1983 Apr 10;258(7):4623-9.
10
Molecular cloning and sequencing of mRNAs coding for minor adult globin polypeptides of Xenopus laevis.非洲爪蟾成年次要珠蛋白多肽编码mRNA的分子克隆与测序
Nucleic Acids Res. 1983 Mar 11;11(5):1543-53. doi: 10.1093/nar/11.5.1543.