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前列腺癌潜在诊断和预后生物标志物的鉴定。

Identification of potential diagnostic and prognostic biomarkers for prostate cancer.

作者信息

Zhang Qiang, Yin Xiujuan, Pan Zhiwei, Cao Yingying, Han Shaojie, Gao Guojun, Gao Zhiqin, Pan Zhifang, Feng Weiguo

机构信息

College of Bioscience and Technology, Weifang Medical University, Weifang, Shandong 261053, P.R. China.

Department of Medicine, Laizhou Development Zone Hospital, Yantai, Shandong 261400, P.R. China.

出版信息

Oncol Lett. 2019 Oct;18(4):4237-4245. doi: 10.3892/ol.2019.10765. Epub 2019 Aug 16.

Abstract

Prostate cancer (PCa) is one of the most common malignant tumors worldwide. The aim of the present study was to determine potential diagnostic and prognostic biomarkers for PCa. The GSE103512 dataset was downloaded, and the differentially expressed genes (DEGs) were screened. Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) and protein-protein interaction (PPI) analyses of DEGs were performed. The result of GO analysis suggested that the DEGs were mostly enriched in 'carboxylic acid catabolic process', 'cell apoptosis', 'cell proliferation' and 'cell migration'. KEGG analysis results indicated that the DEGs were mostly concentrated in 'metabolic pathways', 'ECM-receptor interaction', the 'PI3K-Akt pathway' and 'focal adhesion'. The PPI analysis results showed that Golgi membrane protein 1 (GOLM1), melanoma inhibitory activity member 3 (MIA3), ATP citrate lyase (ACLY) and G protein subunit β2 (GNB2) were the key genes in PCa, and the Module analysis revealed that they were associated with 'ECM-receptor interaction', 'focal adhesion', the 'PI3K-Akt pathway' and the 'metabolic pathway'. Subsequently, the gene expression was confirmed using Gene Expression Profiling Interactive Analysis and the Human Protein Atlas. The results demonstrated that GOLM1 and ACLY expression was significantly upregulated (P<0.05) in PCa compared with that in normal tissues. Receiver operating characteristic and survival analyses were performed. The results showed that area under the curve values of these genes all exceeded 0.85, and high expression of these genes was associated with poor survival in patients with PCa. In conclusion, this study identified GOLM1 and ACLY in PCa, which may be potential diagnostic and prognostic biomarker of PCa.

摘要

前列腺癌(PCa)是全球最常见的恶性肿瘤之一。本研究的目的是确定PCa潜在的诊断和预后生物标志物。下载了GSE103512数据集,并筛选了差异表达基因(DEGs)。对DEGs进行了基因本体论(GO)、京都基因与基因组百科全书(KEGG)和蛋白质-蛋白质相互作用(PPI)分析。GO分析结果表明,DEGs主要富集于“羧酸分解代谢过程”、“细胞凋亡”、“细胞增殖”和“细胞迁移”。KEGG分析结果表明,DEGs主要集中在“代谢途径”、“细胞外基质-受体相互作用”、“PI3K-Akt途径”和“粘着斑”。PPI分析结果显示,高尔基体膜蛋白1(GOLM1)、黑色素瘤抑制活性成员3(MIA3)、ATP柠檬酸裂解酶(ACLY)和G蛋白亚基β2(GNB2)是PCa中的关键基因,模块分析表明它们与“细胞外基质-受体相互作用”、“粘着斑”、“PI3K-Akt途径”和“代谢途径”相关。随后,使用基因表达谱交互式分析和人类蛋白质图谱对基因表达进行了验证。结果表明,与正常组织相比,PCa中GOLM1和ACLY的表达显著上调(P<0.05)。进行了受试者工作特征分析和生存分析。结果表明,这些基因的曲线下面积值均超过0.85,且这些基因的高表达与PCa患者的不良生存相关。总之,本研究在PCa中鉴定出GOLM1和ACLY,它们可能是PCa潜在的诊断和预后生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e2c2/6757266/b623b86674f4/ol-18-04-4237-g00.jpg

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