• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

相似文献

1
Origin of horsetails and the role of whole-genome duplication in plant macroevolution.木贼的起源和全基因组复制在植物宏观进化中的作用。
Proc Biol Sci. 2019 Nov 6;286(1914):20191662. doi: 10.1098/rspb.2019.1662. Epub 2019 Oct 30.
2
Horsetails Are Ancient Polyploids: Evidence from Equisetum giganteum.木贼是古老的多倍体:来自巨大木贼的证据。
Plant Cell. 2015 Jun;27(6):1567-78. doi: 10.1105/tpc.15.00157. Epub 2015 May 22.
3
Constraining the timing of whole genome duplication in plant evolutionary history.限制植物进化史上全基因组复制的时间。
Proc Biol Sci. 2017 Jul 12;284(1858). doi: 10.1098/rspb.2017.0912.
4
The Origin of the Legumes is a Complex Paleopolyploid Phylogenomic Tangle Closely Associated with the Cretaceous-Paleogene (K-Pg) Mass Extinction Event.豆类植物的起源是一个复杂的古多倍体系统发育的纠结,与白垩纪-古近纪(K-Pg)大灭绝事件密切相关。
Syst Biol. 2021 Apr 15;70(3):508-526. doi: 10.1093/sysbio/syaa041.
5
Impact of whole-genome duplication events on diversification rates in angiosperms.全基因组加倍事件对被子植物多样化速率的影响。
Am J Bot. 2018 Mar;105(3):348-363. doi: 10.1002/ajb2.1060. Epub 2018 May 2.
6
Tangled up in two: a burst of genome duplications at the end of the Cretaceous and the consequences for plant evolution.纠缠于二者之间:白垩纪末期的一阵基因组复制及其对植物进化的影响
Philos Trans R Soc Lond B Biol Sci. 2014 Aug 5;369(1648). doi: 10.1098/rstb.2013.0353.
7
Whole-Genome Duplication and Plant Macroevolution.全基因组复制与植物宏观进化。
Trends Plant Sci. 2018 Oct;23(10):933-945. doi: 10.1016/j.tplants.2018.07.006. Epub 2018 Aug 16.
8
No phylogenetic evidence for angiosperm mass extinction at the Cretaceous-Palaeogene (K-Pg) boundary.没有证据表明在白垩纪-古近纪(K-Pg)之交发生过被子植物大灭绝。
Biol Lett. 2023 Sep;19(9):20230314. doi: 10.1098/rsbl.2023.0314. Epub 2023 Sep 13.
9
Polyploidy and genome evolution in plants.植物中的多倍体与基因组进化
Curr Opin Genet Dev. 2015 Dec;35:119-25. doi: 10.1016/j.gde.2015.11.003. Epub 2015 Dec 2.
10
Ancient WGD events as drivers of key innovations in angiosperms.古多倍体化事件是被子植物关键创新的驱动因素。
Curr Opin Plant Biol. 2016 Apr;30:159-65. doi: 10.1016/j.pbi.2016.03.015. Epub 2016 Apr 8.

引用本文的文献

1
Accurate Inference of the Polyploid Continuum Using Forward-Time Simulations.使用正向时间模拟对多倍体连续统进行准确推断。
Mol Biol Evol. 2024 Dec 6;41(12). doi: 10.1093/molbev/msae241.
2
From Stem to Spectrum: Phytochemical Characterization of Five Species and Evaluation of Their Antioxidant Potential.从茎到谱:五种物种的植物化学特征及其抗氧化潜力评估。
Molecules. 2024 Jun 13;29(12):2821. doi: 10.3390/molecules29122821.
3
A novel method for identifying key genes in macroevolution based on deep learning with attention mechanism.基于深度学习注意力机制的宏观进化中关键基因识别的新方法。
Sci Rep. 2023 Nov 13;13(1):19727. doi: 10.1038/s41598-023-47113-9.
4
Salmonidae Genome: Features, Evolutionary and Phylogenetic Characteristics.鲑科鱼类基因组:特征、进化和系统发育特征。
Genes (Basel). 2022 Nov 27;13(12):2221. doi: 10.3390/genes13122221.
5
Revisiting ancient polyploidy in leptosporangiate ferns.重温薄囊蕨类植物中的古老多倍体现象。
New Phytol. 2023 Feb;237(4):1405-1417. doi: 10.1111/nph.18607. Epub 2022 Dec 7.
6
Differential Accumulation of Metabolites and Transcripts Related to Flavonoid, Styrylpyrone, and Galactolipid Biosynthesis in Species and Tissue Types.与黄酮类、苯乙烯基吡喃酮和半乳糖脂生物合成相关的代谢物和转录本在物种和组织类型中的差异积累
Metabolites. 2022 Apr 29;12(5):403. doi: 10.3390/metabo12050403.
7
Charting the genomic landscape of seed-free plants.绘制无种子植物的基因组图谱。
Nat Plants. 2021 May;7(5):554-565. doi: 10.1038/s41477-021-00888-z. Epub 2021 Apr 5.
8
Biogeography and genome size evolution of the oldest extant vascular plant genus, Equisetum (Equisetaceae).最古老现存维管植物属石松(木贼科)的生物地理学和基因组大小演化。
Ann Bot. 2021 Apr 17;127(5):681-695. doi: 10.1093/aob/mcab005.
9
Using computer vision on herbarium specimen images to discriminate among closely related horsetails ().利用计算机视觉技术处理植物标本图像,以区分近缘木贼类植物()。
Appl Plant Sci. 2020 Jul 1;8(6):e11372. doi: 10.1002/aps3.11372. eCollection 2020 Jun.

本文引用的文献

1
MCMCtreeR: functions to prepare MCMCtree analyses and visualize posterior ages on trees.MCMCtreeR:用于准备 MCMCtree 分析和在树上可视化后验年龄的函数。
Bioinformatics. 2019 Dec 15;35(24):5321-5322. doi: 10.1093/bioinformatics/btz554.
2
Macrosynteny analysis shows the absence of ancient whole-genome duplication in lepidopteran insects.宏观共线性分析表明鳞翅目昆虫不存在古老的全基因组复制现象。
Proc Natl Acad Sci U S A. 2019 Feb 5;116(6):1816-1818. doi: 10.1073/pnas.1817937116. Epub 2019 Jan 23.
3
Polyploidy as a mechanism for surviving global change.多倍体作为一种应对全球变化的生存机制。
New Phytol. 2019 Jan;221(1):5-6. doi: 10.1111/nph.15513.
4
wgd-simple command line tools for the analysis of ancient whole-genome duplications.wgd-simple 命令行工具,用于分析古代全基因组复制。
Bioinformatics. 2019 Jun 1;35(12):2153-2155. doi: 10.1093/bioinformatics/bty915.
5
Evolution of metazoan morphological disparity.后生动物形态差异的进化。
Proc Natl Acad Sci U S A. 2018 Sep 18;115(38):E8909-E8918. doi: 10.1073/pnas.1810575115. Epub 2018 Sep 4.
6
Whole-Genome Duplication and Plant Macroevolution.全基因组复制与植物宏观进化。
Trends Plant Sci. 2018 Oct;23(10):933-945. doi: 10.1016/j.tplants.2018.07.006. Epub 2018 Aug 16.
7
Origin of Equisetum: Evolution of horsetails (Equisetales) within the major euphyllophyte clade Sphenopsida.问荆(Equisetales)的起源:大型真蕨植物类群楔叶植物亚门内木贼的进化。
Am J Bot. 2018 Aug;105(8):1286-1303. doi: 10.1002/ajb2.1125. Epub 2018 Jul 19.
8
Impact of whole-genome duplication events on diversification rates in angiosperms.全基因组加倍事件对被子植物多样化速率的影响。
Am J Bot. 2018 Mar;105(3):348-363. doi: 10.1002/ajb2.1060. Epub 2018 May 2.
9
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7.贝叶斯系统发生学中使用 Tracer 1.7 进行的后验总结
Syst Biol. 2018 Sep 1;67(5):901-904. doi: 10.1093/sysbio/syy032.
10
Significance of whole-genome duplications on the emergence of evolutionary novelties.全基因组加倍在进化新事物出现中的意义。
Brief Funct Genomics. 2018 Sep 27;17(5):329-338. doi: 10.1093/bfgp/ely007.

木贼的起源和全基因组复制在植物宏观进化中的作用。

Origin of horsetails and the role of whole-genome duplication in plant macroevolution.

机构信息

School of Earth Sciences, University of Bristol, Bristol BS8 1TQ, UK.

Department of Plant Sciences, University of Oxford, South Parks Road, Oxford OX1 3RB, UK.

出版信息

Proc Biol Sci. 2019 Nov 6;286(1914):20191662. doi: 10.1098/rspb.2019.1662. Epub 2019 Oct 30.

DOI:10.1098/rspb.2019.1662
PMID:31662084
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6842847/
Abstract

Whole-genome duplication (WGD) has occurred commonly in land plant evolution and it is often invoked as a causal agent in diversification, phenotypic and developmental innovation, as well as conferring extinction resistance. The ancient and iconic lineage of is no exception, where WGD has been inferred to have occurred prior to the Cretaceous-Palaeogene (K-Pg) boundary, coincident with WGD events in angiosperms. In the absence of high species diversity, WGD in is interpreted to have facilitated the long-term survival of the lineage. However, this characterization remains uncertain as these analyses of the WGD event have not accounted for fossil diversity. Here, we analyse additional available transcriptomes and summarize the fossil record. Our results confirm support for at least one WGD event shared among the majority of extant species. Furthermore, we use improved dating methods to constrain the age of gene duplication in geological time and identify two successive WGD events. The two WGD events occurred during the Carboniferous and Triassic, respectively, rather than in association with the K-Pg boundary. WGD events are believed to drive high rates of trait evolution and innovations, but analysed trends of morphological evolution across the historical diversity of provide little evidence for further macroevolutionary consequences following WGD. WGD events cannot have conferred extinction resistance to the lineage through the K-Pg boundary since the ploidy events occurred hundreds of millions of years before this mass extinction and we find evidence of extinction among fossil polyploid lineages. Our findings precipitate the need for a review of the proposed roles of WGDs in biological innovation and extinction survival in angiosperm and non-angiosperm lineages alike.

摘要

全基因组复制(WGD)在陆地植物进化中经常发生,它通常被认为是多样化、表型和发育创新的原因,并赋予了灭绝抗性。标志性的谱系也不例外,其中 WGD 被推断发生在白垩纪-古近纪(K-Pg)边界之前,与被子植物的 WGD 事件同时发生。由于物种多样性低,被解释为促进了该谱系的长期生存。然而,这种特征仍然不确定,因为这些对谱系 WGD 事件的分析没有考虑到化石多样性。在这里,我们分析了更多可用的转录组并总结了化石记录。我们的结果证实了大多数现存的支持至少一次 WGD 事件。此外,我们使用改进的测年方法将基因复制的年龄限制在地质时间内,并确定了两个连续的谱系 WGD 事件。这两个 WGD 事件分别发生在石炭纪和三叠纪,而不是与 K-Pg 边界相关。WGD 事件被认为会导致性状进化和创新的高速率,但分析跨越谱系历史多样性的形态进化趋势几乎没有证据表明 WGD 后有进一步的宏观进化后果。WGD 事件不能通过 K-Pg 边界赋予谱系灭绝抗性,因为多倍体事件发生在这次大规模灭绝之前的数亿年,我们发现化石多倍体谱系中存在灭绝的证据。我们的发现需要对 WGD 在被子植物和非被子植物谱系中的生物创新和灭绝生存中的作用进行审查。