Centre de Recherche en Cancérologie de Marseille (CRCM), INSERM U1068, CNRS, UMR 7258, Aix-Marseille Université and Institut Paoli-Calmettes, Parc Scientifique et Technologique de Luminy, 163 Avenue de Luminy, 13288, Marseille, France.
CNR-NANOTEC, Licryl-UOS Cosenza and CEMIF.Cal, Department of Physics, University of Calabria, Via P. Bucci, Cubo 31 C, Arcavacata di Rende, 87036, Cosenza, Italy.
Cell Mol Life Sci. 2020 May;77(9):1695-1707. doi: 10.1007/s00018-019-03347-3. Epub 2019 Oct 30.
Intrinsically disordered proteins (IDPs) do not have a well-defined structure under physiological conditions, but they have key roles in cell signaling and regulation, and they are frequently related to the development of diseases, such as cancer and other malignancies. This has converted IDPs in attractive therapeutic targets; however, targeting IDPs is challenging because of their dynamic nature. In the last years, different experimental and computational approaches, as well as the combination of both, have been explored to identify molecules to target either the hot-spots or the allosteric sites of IDPs. In this review, we summarize recent developments in successful targeting of IDPs, all of which are involved in different cancer types. The strategies used to develop and design (or in one particular example, to repurpose) small molecules targeting IDPs are, in a global sense, similar to those used in well-folded proteins: (1) screening of chemically diverse or target-oriented compound libraries; or (2) study of the interfaces involved in recognition of their natural partners, and design of molecular candidates capable of binding to such binding interface. We describe the outcomes of using these approaches in targeting IDPs involved in cancer, in the view to providing insight, to target IDPs in general. In a broad sense, the designed small molecules seem to target the most hydrophobic regions of the IDPs, hampering macromolecule (DNA or protein)-IDP interactions; furthermore, in most of the molecule-IDP complexes described so far, the protein remains disordered.
无规蛋白(IDP)在生理条件下没有明确的结构,但它们在细胞信号转导和调节中发挥着关键作用,并且经常与癌症和其他恶性肿瘤等疾病的发展有关。这使得 IDP 成为有吸引力的治疗靶点;然而,由于其动态性质,靶向 IDP 具有挑战性。在过去的几年中,已经探索了不同的实验和计算方法,以及两者的结合,以鉴定靶向 IDP 的热点或变构位点的分子。在这篇综述中,我们总结了最近成功靶向 IDP 的研究进展,这些 IDP 都涉及不同类型的癌症。用于开发和设计(或在一个特殊示例中,重新利用)靶向 IDP 的小分子的策略,从全局意义上讲,与那些针对折叠蛋白的策略相似:(1)筛选化学多样性或靶向化合物库;或(2)研究涉及识别其天然配体的界面,并设计能够与这种结合界面结合的分子候选物。我们描述了在靶向涉及癌症的 IDP 中使用这些方法的结果,以期提供针对一般 IDP 的见解。从广义上讲,设计的小分子似乎靶向 IDP 最疏水的区域,阻碍了大分子(DNA 或蛋白质)-IDP 相互作用;此外,到目前为止描述的大多数分子-IDP 复合物中,蛋白质仍然是无序的。