Department of Genetics, Stanford University, Stanford, CA 94305-5477, USA.
Nucleic Acids Res. 2020 Jan 8;48(D1):D882-D889. doi: 10.1093/nar/gkz1062.
The Encyclopedia of DNA Elements (ENCODE) is an ongoing collaborative research project aimed at identifying all the functional elements in the human and mouse genomes. Data generated by the ENCODE consortium are freely accessible at the ENCODE portal (https://www.encodeproject.org/), which is developed and maintained by the ENCODE Data Coordinating Center (DCC). Since the initial portal release in 2013, the ENCODE DCC has updated the portal to make ENCODE data more findable, accessible, interoperable and reusable. Here, we report on recent updates, including new ENCODE data and assays, ENCODE uniform data processing pipelines, new visualization tools, a dataset cart feature, unrestricted public access to ENCODE data on the cloud (Amazon Web Services open data registry, https://registry.opendata.aws/encode-project/) and more comprehensive tutorials and documentation.
DNA 元件百科全书（ENCODE）是一个正在进行的合作研究项目，旨在鉴定人类和小鼠基因组中的所有功能元件。ENCODE 联盟生成的数据可在 ENCODE 门户（https://www.encodeproject.org/）免费获取，该门户由 ENCODE 数据协调中心（DCC）开发和维护。自 2013 年首次发布门户以来，ENCODE DCC 已对其进行了更新，以提高 ENCODE 数据的可发现性、可访问性、互操作性和可重用性。在这里，我们报告了最近的更新，包括新的 ENCODE 数据和检测、ENCODE 统一数据处理管道、新的可视化工具、数据集推车功能、在云中（Amazon Web Services 开放数据注册表，https://registry.opendata.aws/encode-project/）对 ENCODE 数据的无限制公共访问，以及更全面的教程和文档。
