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基于 DNA 的粪便源追踪污染饮用水导致 2019 年挪威大规模弯曲杆菌暴发

DNA-based faecal source tracking of contaminated drinking water causing a large Campylobacter outbreak in Norway 2019.

机构信息

Norwegian Institute of Bioeconomy Research (NIBIO), Division of Environment and Natural Resources, Fredrik A. Dahls Vei 20, 1433, Aas, Norway.

Norwegian Institute of Bioeconomy Research (NIBIO), Division of Environment and Natural Resources, Fredrik A. Dahls Vei 20, 1433, Aas, Norway.

出版信息

Int J Hyg Environ Health. 2020 Mar;224:113420. doi: 10.1016/j.ijheh.2019.113420. Epub 2019 Nov 18.

Abstract

During June 2019, an outbreak of campylobacteriosis occurred in Askøy, an island northwest of Bergen, Norway. According to the publicly available records, over 2000 residents fell ill and 76 were hospitalised, and two deaths were suspected to be associated with Campylobacter infection. By investigating the epidemic pattern and scope, an old caved drinking water holding pool was identified that had been faecally contaminated as indicated by the presence of Escherichia coli (E. coli). Furthermore, Campylobacter bacteria were found at several points in the water distribution system. In the escalated water health crisis, tracking down the infectious source became pivotal for the local municipality in order to take prompt and appropriate action to control the epidemic. A major task was to identify the primary faecal pollution source, which could further assist in tracking down the epidemic origin. Water from the affected pool was analysed using quantitative microbial source tracking (QMST) applying host-specific Bacteroidales 16S rRNA genetic markers. In addition, Campylobacter jejuni, Enterococcus faecalis, Clostridium perfringens and Shiga toxin-producing E. coli were detected. The QMST outcomes revealed that non-human (zoogenic) sources accounted predominantly for faecal pollution. More precisely, 69% of the faecal water contamination originated from horses.

摘要

2019 年 6 月,挪威卑尔根西北部的 Askøy 岛上爆发了一起弯曲杆菌病疫情。根据公开记录,超过 2000 名居民患病,76 人住院,有两例疑似与弯曲杆菌感染有关的死亡病例。通过调查疫情模式和范围,确定了一个旧的洞穴饮用水蓄水池受到粪便污染,大肠杆菌(E. coli)的存在表明了这一点。此外,在供水系统的多个点发现了弯曲杆菌。在升级的水卫生危机中,当地市政府必须追踪感染源,以便迅速采取适当行动控制疫情。一项主要任务是确定主要的粪便污染源,这将有助于进一步追踪疫情的起源。使用针对特定宿主的 Bacteroidales 16S rRNA 遗传标记的定量微生物源追踪(QMST)分析受影响水池的水。此外,还检测到空肠弯曲菌、粪肠球菌、产气荚膜梭菌和产志贺毒素大肠埃希菌。QMST 结果表明,非人类(动物源)来源主要导致粪便污染。更准确地说,69%的粪便水污染来自马。

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