Challa Anup P, Lavieri Robert R, Lewis Judith T, Zaleski Nicole M, Shirey-Rice Jana K, Harris Paul A, Aronoff David M, Pulley Jill M
Vanderbilt Institute for Clinical and Translational Research, Vanderbilt University Medical Center, Nashville, Tennessee.
Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee.
Assay Drug Dev Technol. 2019 Nov/Dec;17(8):352-363. doi: 10.1089/adt.2019.950. Epub 2019 Nov 26.
Drug repurposing is the application of approved drugs to treat diseases separate and distinct from their original indications. Herein, we define the scope of all practical precision drug repurposing using DrugBank, a publicly available database of pharmacological agents, and BioVU, a large, de-identified DNA repository linked to longitudinal electronic health records at Vanderbilt University Medical Center. We present a method of repurposing candidate prioritization through integration of pharmacodynamic and marketing variables from DrugBank with quality control thresholds for genomic data derived from the DNA samples within BioVU. Through the synergy of delineated "target-action pairs," along with target genomics, we identify ∼230 "pairs" that represent all practical opportunities for genomic drug repurposing. From this analysis, we present a pipeline of 14 repurposing candidates across 7 disease areas that link to our repurposability platform and present high potential for randomized controlled trial startup in upcoming months.
药物重新利用是指将已获批药物用于治疗与其原始适应症不同的疾病。在此,我们利用DrugBank(一个公开可用的药理制剂数据库)和BioVU(范德比尔特大学医学中心一个与纵向电子健康记录相关联的大型匿名DNA储存库)来定义所有实际精准药物重新利用的范围。我们提出了一种通过将DrugBank中的药效学和市场变量与BioVU内DNA样本衍生的基因组数据的质量控制阈值相结合来对重新利用候选药物进行优先级排序的方法。通过划定的“靶点-作用对”与靶点基因组学的协同作用,我们识别出约230个“对”,这些“对”代表了基因组药物重新利用的所有实际机会。通过该分析,我们展示了一个涉及7个疾病领域的14个重新利用候选药物的流程,这些候选药物与我们的可重新利用性平台相关联,并且在未来几个月启动随机对照试验的潜力很大。