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食管鳞癌患者的口腔微生物组。

Oral Microbiome in Patients with Oesophageal Squamous Cell Carcinoma.

机构信息

Department of Laboratory Medicine, the First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.

出版信息

Sci Rep. 2019 Dec 13;9(1):19055. doi: 10.1038/s41598-019-55667-w.

Abstract

To investigate the oral microflora of patients with oesophageal squamous cell carcinoma (ESCC), saliva samples were collected from 20 patients with ESCC and 21 healthy controls. The V3-V4 region of 16S rDNA was amplified and sequenced by the Illumina MiSeq high-throughput sequencing platform. The final sequences were used for OTU analysis. Alpha and beta diversity analysis showed that the bacterial diversity and richness of the ESCC group were lower than those of the control group, while the variability of the ESCC group was higher than that of the control group. According to the Metastats difference analysis and LEfSe analysis, the high risk of ESCC may be related to Actinomyces and Atopobium, while the healthy control group is closely related to Fusobacterium and Porphyromonas (the analysis was performed at the genus level). The establishment of the relationship between oral microbiota and risk of ESCC may lead to significant advances in understanding the aetiology of cancer and may open a new research paradigm for cancer prevention.

摘要

为了研究食管鳞状细胞癌(ESCC)患者的口腔微生物群,我们从 20 名 ESCC 患者和 21 名健康对照者中收集了唾液样本。通过 Illumina MiSeq 高通量测序平台对 16S rDNA 的 V3-V4 区进行扩增和测序。最终序列用于 OTU 分析。α和β多样性分析表明,ESCC 组的细菌多样性和丰富度低于对照组,而 ESCC 组的变异性高于对照组。根据 Metastats 差异分析和 LEfSe 分析,ESCC 的高风险可能与 Actinomyces 和 Atopobium 有关,而健康对照组则与 Fusobacterium 和 Porphyromonas 密切相关(分析在属水平上进行)。建立口腔微生物群与 ESCC 风险之间的关系可能会导致对癌症病因的认识取得重大进展,并为癌症预防开辟新的研究范例。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/389c/6910992/2ab1a89d6528/41598_2019_55667_Fig1_HTML.jpg

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