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基于同源放射组学分析的肺癌患者预后预测

Homological radiomics analysis for prognostic prediction in lung cancer patients.

机构信息

Division of Medical Quantum Science, Department of Health Sciences, Graduate School of Medical Sciences, Kyushu University, 3-1-1 Maidashi, Higashi-ku, Fukuoka 812-8582, Japan.

Division of Medical Quantum Science, Department of Health Sciences, Faculty of Medical Sciences, Kyushu University, 3-1-1, Maidashi, Higashi-ku, Fukuoka 812-8582, Japan.

出版信息

Phys Med. 2020 Jan;69:90-100. doi: 10.1016/j.ejmp.2019.11.026. Epub 2019 Dec 16.

Abstract

PURPOSE

This study explored a novel homological analysis method for prognostic prediction in lung cancer patients.

MATERIALS AND METHODS

The potential of homology-based radiomic features (HFs) was investigated by comparing HFs to conventional wavelet-based radiomic features (WFs) and combined radiomic features consisting of HFs and WFs (HWFs), using training (n = 135) and validation (n = 70) datasets, and Kaplan-Meier analysis. A total of 13,824 HFs were derived through homology-based texture analysis using Betti numbers, which represent the topologically invariant morphological characteristics of lung cancer. The prognostic potential of HFs was evaluated using statistically significant differences (p-values, log-rank test) to compare the survival curves of high- and low-risk patients. Those patients were stratified into high- and low-risk groups using the medians of the radiomic scores of signatures constructed with an elastic-net-regularized Cox proportional hazard model. Furthermore, deep learning (DL) based on AlexNet was utilized to compare HFs by stratifying patients into the two groups using a network that was pre-trained with over one million natural images from an ImageNet database.

RESULTS

For the training dataset, the p-values between the two survival curves were 6.7 × 10 (HF), 5.9 × 10 (WF), 7.4 × 10 (HWF), and 1.1 × 10 (DL). The p-values for the validation dataset were 3.4 × 10 (HF), 6.7 × 10 (WF), 1.7 × 10 (HWF), and 1.2 × 10 (DL).

CONCLUSION

This study demonstrates the excellent potential of HFs for prognostic prediction in lung cancer patients.

摘要

目的

本研究探索了一种新的同源分析方法,用于预测肺癌患者的预后。

材料与方法

通过在训练(n=135)和验证(n=70)数据集以及 Kaplan-Meier 分析中比较同源放射组学特征(HFs)与传统基于小波的放射组学特征(WFs)和包含 HFs 和 WFs 的联合放射组学特征(HWFs),研究了基于同源的放射组学特征(HFs)的潜力。通过使用贝蒂数进行基于同源的纹理分析,共得出了 13824 个 HFs,贝蒂数表示肺癌的拓扑不变形态特征。使用统计学上显著差异(p 值,对数秩检验)来比较高风险和低风险患者的生存曲线,评估 HFs 的预后潜力。使用弹性网正则化 Cox 比例风险模型构建签名的放射组学评分中位数,将这些患者分为高风险和低风险组。此外,使用基于 AlexNet 的深度学习(DL),通过使用一个使用来自 ImageNet 数据库的超过 100 万张自然图像预训练的网络,将患者分为两组,来比较 HFs。

结果

对于训练数据集,两条生存曲线之间的 p 值分别为 6.7×10(HF)、5.9×10(WF)、7.4×10(HWF)和 1.1×10(DL)。验证数据集的 p 值分别为 3.4×10(HF)、6.7×10(WF)、1.7×10(HWF)和 1.2×10(DL)。

结论

本研究表明 HFs 具有出色的预测肺癌患者预后的潜力。

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