College of Optical Sciences, University of Arizona, Tucson, AZ 85721, USA.
Departments of Radiology and Integrated Mathematical Oncology, Moffitt Cancer Center, 1292 Magnolia Drive, Tampa, FL 33612, USA.
Int J Mol Sci. 2019 Dec 18;21(1):9. doi: 10.3390/ijms21010009.
The Extreme Physical Information EPI principle states that maximum information transmission or, equivalently, a minimum information loss is a fundamental property of nature. Prior work has demonstrated the universal EPI principle allows derivation of nearly all physical laws. Here, we investigate whether EPI can similarly give rise to the fundamental law of life: Evolution. Living systems require information to survive and proliferate. Heritable information in the genome encodes the structure and function of cellular macromolecules but this information remains fixed over time. In contrast, a cell must rapidly and continuously access, analyze, and respond to a wide range of continuously changing spatial and temporal information in the environment. We propose these two information dynamics are linked because the genes encode the structure of the macromolecules that form information conduits necessary for the dynamical interactions with the external environment. However, because the genome does not have the capacity to precisely locate the time and location of external signals, we propose the cell membrane is the site at which most external information is received and processed. In our model, an external signal is detected by gates on transmembrane ion channel and transmitted into the cytoplasm through ions that flow along pre-existing concentration gradients when the gate opens. The resulting cytoplasmic ion "puff" is localized in both time and space, thus producing spatial and temporal information. Small, localized signals in the cytoplasm are "processed" through alterations in the function and location of peripheral membrane proteins. Larger perturbations produce prolonged or spatially extensive changes in cytoplasmic ion concentrations that can be transmitted to other organelles via ion flows along elements of the cytoskeleton. An evolutionary constraint to the ever-increasing acquisition of environmental information is the cost of doing so. One solution to this trade-off is the evolution of information conduits that minimize signal loss during transmission. Since the structures of these conduits are encoded in the genome, evolution of macromolecular conduits that minimize signal loss is linked to and, in fact, governed by a universal principle, termed extreme physical information (EPI). Mathematical analysis of information dynamics based on the flow of ions through membrane channels and along wire-like cytoskeleton macromolecules fulfills the EPI principle. Thus, the empirically derived model of evolution by natural selection, although uniquely applicable to living systems, is theoretically grounded in a universal principle that can also be used to derive the laws of physics. Finally, if minimization of signal loss is a mechanism to overcome energy constraints, the model predicts increasing information and associated complexity are closely linked to increased efficiency of energy production or improved substrate acquisition.
极端物理信息 EPI 原理指出,最大信息传输或等效的最小信息损失是自然的基本属性。先前的工作已经证明,普遍的 EPI 原理允许推导出几乎所有的物理定律。在这里,我们研究 EPI 是否同样可以产生生命的基本法则:进化。生命系统需要信息才能生存和繁殖。基因组中的遗传信息编码细胞大分子的结构和功能,但这些信息随时间保持不变。相比之下,细胞必须快速且连续地访问、分析和响应环境中不断变化的广泛的时空信息。我们提出这两种信息动态是相关的,因为基因编码的大分子结构形成了与外部环境动态相互作用所需的信息通道。然而,由于基因组没有精确定位外部信号的时间和位置的能力,我们提出细胞膜是接收和处理大多数外部信息的场所。在我们的模型中,外部信号通过跨膜离子通道上的门检测到,并通过门打开时沿着预先存在的浓度梯度流动的离子传送到细胞质中。细胞质中产生的离子“脉冲”在时间和空间上都是局部的,从而产生时空信息。细胞质中的小局部信号通过改变外周膜蛋白的功能和位置来“处理”。较大的干扰会产生细胞质中离子浓度的持续或空间广泛变化,这些变化可以通过沿着细胞骨架元素的离子流传递到其他细胞器。不断增加获取环境信息的进化受到成本的限制。解决这种权衡的一个解决方案是进化信息通道,这些信息通道在传输过程中最小化信号损失。由于这些通道的结构是在基因组中编码的,因此进化出的可以最小化信号损失的大分子通道与一个普遍的原则联系在一起,这个原则称为极端物理信息(EPI)。基于离子通过膜通道和线状细胞骨架大分子流动的信息动力学的数学分析满足 EPI 原理。因此,虽然自然选择的进化经验模型是唯一适用于生命系统的,但它在理论上基于一个普遍的原则,该原则也可以用于推导出物理定律。最后,如果最小化信号损失是克服能量限制的机制,那么该模型预测信息的增加和相关的复杂性与能量产生效率的提高或底物获取的改善密切相关。