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脊椎动物 Alpha2,8-唾液酸转移酶(ST8Sia):硬骨鱼视角。

Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective.

机构信息

Institute of Reproductive Biology, Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196 Dummerstorf, Germany.

Université de Lille, CNRS, UMR 8576-UGSF-Unité de Glycobiologie Structurale et Fonctionnelle, F-59000 Lille, France.

出版信息

Int J Mol Sci. 2020 Jan 14;21(2):513. doi: 10.3390/ijms21020513.

Abstract

We identified and analyzed α2,8-sialyltransferases sequences among 71 ray-finned fish species to provide the first comprehensive view of the Teleost ST8Sia repertoire. This repertoire expanded over the course of Vertebrate evolution and was primarily shaped by the whole genome events R1 and R2, but not by the Teleost-specific R3. We showed that duplicated genes like , , and have disappeared from Tetrapods, whereas their orthologues were maintained in Teleosts. Furthermore, several fish species specific genome duplications account for the presence of multiple poly-α2,8-sialyltransferases in the Salmonidae (ST8Sia II-r1 and ST8Sia II-r2) and in (ST8Sia IV-r1 and ST8Sia IV-r2). Paralogy and synteny analyses provided more relevant and solid information that enabled us to reconstruct the evolutionary history of genes in fish genomes. Our data also indicated that, while the mammalian ST8Sia family is comprised of six subfamilies forming di-, oligo-, or polymers of α2,8-linked sialic acids, the fish ST8Sia family, amounting to a total of 10 genes in fish, appears to be much more diverse and shows a patchy distribution among fish species. A focus on Salmonidae showed that (i) the two copies of genes have overall contrasted tissue-specific expressions, with noticeable changes when compared with human co-orthologue, and that (ii) is weakly expressed. Multiple sequence alignments enabled us to detect changes in the conserved polysialyltransferase domain (PSTD) of the fish sequences that could account for variable enzymatic activities. These data provide the bases for further functional studies using recombinant enzymes.

摘要

我们在 71 种硬骨鱼类中鉴定和分析了α2,8-唾液酸转移酶序列,为脊椎动物 ST8Sia 库提供了第一个全面的视角。这个库在脊椎动物进化过程中不断扩张,主要是由全基因组事件 R1 和 R2 塑造的,但不是由硬骨鱼特异性的 R3 塑造的。我们表明,像 、 和 这样的基因在四足动物中已经消失,而它们的同源物在硬骨鱼中被保留。此外,一些鱼类特有的基因组加倍解释了鲑科(ST8Sia II-r1 和 ST8Sia II-r2)和 (ST8Sia IV-r1 和 ST8Sia IV-r2)中多个多聚α2,8-唾液酸转移酶的存在。旁系和同线性分析提供了更相关和更可靠的信息,使我们能够重建鱼类基因组中 基因的进化历史。我们的数据还表明,虽然哺乳动物 ST8Sia 家族由六个亚家族组成,形成二聚体、寡聚体或聚合物的α2,8 连接唾液酸,但鱼类 ST8Sia 家族总共在鱼类中有 10 个基因,似乎更加多样化,并在鱼类物种中呈现斑驳的分布。对鲑科鱼类的研究表明:(i) 基因的两个拷贝总体上具有组织特异性表达的对比,与人类同源物相比有明显变化,而 (ii) 表达较弱。多重序列比对使我们能够检测到鱼类序列中保守的多唾液酸转移酶结构域(PSTD)的变化,这些变化可能导致可变的酶活性。这些数据为使用重组酶进行进一步的功能研究提供了基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6a06/7014012/0e9bcb40cdcd/ijms-21-00513-g001.jpg

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