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“群体进化”——基因组学时代的实验室菌株与谱系

'Community evolution' - laboratory strains and pedigrees in the age of genomics.

作者信息

Dorman Matthew J, Thomson Nicholas R

机构信息

Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire, CB10 1SA, UK.

London School of Hygiene and Tropical Medicine, Keppel St, Bloomsbury, London WC1E 7HT, UK.

出版信息

Microbiology (Reading). 2020 Mar;166(3):233-238. doi: 10.1099/mic.0.000869.

Abstract

Molecular microbiologists depend heavily on laboratory strains of bacteria, which are ubiquitous across the community of research groups working on a common organism. However, this presumes that strains present in different laboratories are in fact identical. Work on a culture of preserved from 1916 provoked us to consider recent studies, which have used both classical genetics and next-generation sequencing to study the heterogeneity of laboratory strains. Here, we review and discuss mutations and phenotypic variation in supposedlyisogenic reference strains of and , and we propose that by virtue of the dissemination of laboratory strains across the world, a large 'community evolution' experiment is currently ongoing.

摘要

分子微生物学家严重依赖实验室细菌菌株,这些菌株在研究同一生物体的研究团队群体中无处不在。然而,这假定了不同实验室中的菌株实际上是相同的。对一株1916年保存下来的培养物的研究促使我们思考最近的一些研究,这些研究使用经典遗传学和新一代测序技术来研究实验室菌株的异质性。在这里,我们回顾并讨论了推测为同基因的参考菌株和中的突变及表型变异,并且我们提出,由于实验室菌株在全球范围内的传播,目前正在进行一项大型的“群体进化”实验。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/47de/7376263/6e99a94966e3/mic-166-233-g001.jpg

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