Department of Chemical and Environmental Engineering, University of California Riverside, Riverside, CA, USA.
Department of Bioengineering, University of California Riverside, Riverside, CA, USA.
Nat Chem Biol. 2020 Feb;16(2):113-121. doi: 10.1038/s41589-019-0452-x. Epub 2020 Jan 23.
Microbial chemical production is a rapidly growing industry, with much of the growth fueled by advances in synthetic biology. New approaches have enabled rapid strain engineering for the production of various compounds; however, translation to industry is often problematic because native phenotypes of model hosts prevent the design of new low-cost bioprocesses. Here, we argue for a new approach that leverages the native stress-tolerant phenotypes of non-conventional microbes that directly address design challenges from the outset. Growth at high temperature, high salt and solvent concentrations, and low pH can enable cost savings by reducing the energy required for product separation, bioreactor cooling, and maintaining sterile conditions. These phenotypes have the added benefit of allowing for the use of low-cost sugar and water resources. Non-conventional hosts are needed because these phenotypes are polygenic and thus far have proven difficult to recapitulate in the common hosts Escherichia coli and Saccharomyces cerevisiae.
微生物化学制造是一个快速发展的行业,其增长的很大一部分得益于合成生物学的进步。新方法使各种化合物的快速菌株工程成为可能;然而,向工业的转化通常存在问题,因为模型宿主的天然表型阻止了新的低成本生物工艺的设计。在这里,我们提倡一种新方法,利用非传统微生物的天然耐应激表型,从一开始就直接解决设计挑战。在高温、高盐和溶剂浓度以及低 pH 值下生长,可以通过减少产品分离、生物反应器冷却和保持无菌条件所需的能源来节省成本。这些表型还有一个额外的好处,就是可以使用低成本的糖和水资源。之所以需要非传统宿主,是因为这些表型是多基因的,迄今为止,在大肠杆菌和酿酒酵母等常见宿主中很难重现这些表型。