Roy and Diana Vagelos Laboratories, Department of Chemistry, University of Pennsylvania, Philadelphia, PA 19104-6323, USA.
Department of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
J Struct Biol. 2020 Apr 1;210(1):107463. doi: 10.1016/j.jsb.2020.107463. Epub 2020 Jan 21.
The unusual diterpene (C) synthase copalyl diphosphate synthase from Penicillium verruculosum (PvCPS) is the first bifunctional terpene synthase identified with both prenyltransferase and class II cyclase activities in a single polypeptide chain with αβγ domain architecture. The C-terminal prenyltransferase α domain generates geranylgeranyl diphosphate which is then cyclized to form copalyl diphosphate at the N-terminal βγ domain interface. We now demonstrate that PvCPS exists as a hexamer at high concentrations - a unique quaternary structure for known αβγ terpene synthases. Hexamer assembly is corroborated by a 2.41 Å-resolution crystal structure of the α domain prenyltransferase obtained from limited proteolysis of full-length PvCPS, as well as the ab initio model of full-length PvCPS derived from small-angle X-ray scattering data. Hexamerization of the prenyltransferase α domain appears to drive the hexamerization of full-length PvCPS. The PvCPS hexamer dissociates into lower-order species at lower concentrations, as evidenced by size-exclusion chromatography in-line with multiangle light scattering, sedimentation velocity analytical ultracentrifugation, and native polyacrylamide gel electrophoresis experiments, suggesting that oligomerization is concentration dependent. Even so, PvCPS oligomer assembly does not affect prenyltransferase activity in vitro.
来自产黄青霉(PvCPS)的不寻常二萜(C)合酶焦磷酸香叶酯合酶(PvCPS)是第一个在单个多肽链中具有前体转移酶和 II 类环化酶活性的双功能萜烯合酶,具有 αβγ 结构域架构。C 端前体转移酶α结构域产生香叶基二磷酸,然后在 N 端βγ 结构域界面环化形成香叶焦磷酸。我们现在证明 PvCPS 在高浓度下以六聚体形式存在 - 这是已知的 αβγ 萜烯合酶的独特四级结构。六聚体组装得到了全长 PvCPS 的有限蛋白水解获得的 α 结构域前体转移酶的 2.41Å 分辨率晶体结构以及从头算模型的证实,该模型来自小角度 X 射线散射数据。前体转移酶α结构域的六聚化似乎驱动全长 PvCPS 的六聚化。六聚体化的前体转移酶α结构域似乎驱动全长 PvCPS 的六聚化。如在线大小排阻色谱 - 多角度光散射、沉降速度分析超速离心和天然聚丙烯酰胺凝胶电泳实验所证明的那样,六聚体在较低浓度下解离成较低阶的物种,这表明寡聚化是浓度依赖性的。即便如此,PvCPS 寡聚体组装并不影响体外的前体转移酶活性。