Department of Biological Sciences, University of Maryland, Baltimore County (UMBC), Baltimore, Maryland, United States of America.
PLoS One. 2020 Jan 27;15(1):e0222479. doi: 10.1371/journal.pone.0222479. eCollection 2020.
Inhibition of the synthesis of an essential ribosomal protein (r-protein) abrogates the assembly of its cognate subunit, while assembly of the other subunit continues. Ribosomal components that are not stably incorporated into ribosomal particles due to the disrupted assembly are rapidly degraded. The 60S protein uL18/L5 is an exception and this protein accumulates extra-ribosomally during inhibition of 60S assembly. Since the r-proteins in each ribosomal subunit are essential only for the formation of their cognate subunit, it would be predicted that accumulation of extra-ribosomal uL18/L5 is specific to restriction of 60S assembly and does not occur abolition of 40S assembly. Contrary to this prediction, we report here that repression of 40S r-protein genes does lead to accumulation of uL18/L5 outside of the ribosome. Furthermore, the effect varies depending on which 40S ribosomal protein is repressed. Our results also show extra-ribosomal uL18/L5 is formed during 60S assembly, not during degradation of mature cytoplasmic 60S subunits. Finally, we propose a model for the accumulation of extra-ribosomal uL18 in response to the abolition of 40S r-proteins.
核糖体蛋白(r-protein)合成的抑制会破坏其同源亚基的组装,而其他亚基的组装仍会继续。由于组装受到破坏,无法稳定地整合到核糖体颗粒中的核糖体成分会迅速降解。60S 蛋白 uL18/L5 是一个例外,这种蛋白在 60S 组装受到抑制时会在核糖体外积累。由于每个核糖体亚基中的 r-蛋白对于其同源亚基的形成是必不可少的,因此可以预测,核糖体外 uL18/L5 的积累是限制 60S 组装的特异性,而不会发生 40S 组装的废除。与这一预测相反,我们在这里报告说,抑制 40S r-蛋白基因确实会导致 uL18/L5 在核糖体外积累。此外,这种效应取决于被抑制的哪种 40S 核糖体蛋白。我们的结果还表明,核糖体外 uL18/L5 是在 60S 组装过程中形成的,而不是在成熟细胞质 60S 亚基降解过程中形成的。最后,我们提出了一个模型,解释了为什么在 40S r-蛋白被废除时会出现核糖体外 uL18 的积累。