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快速重组酶辅助扩增检测法用于肺炎支原体检测。

Use of a rapid recombinase-aided amplification assay for Mycoplasma pneumoniae detection.

机构信息

Department of Bacteriology, Capital Institute of Pediatrics, No. 2 Yabao Road, Chaoyang District, Beijing, 100020, China.

Department of Obstetrics, Southern District of the Fifth Medical Center of PLA General Hospital, No. 8 Dongdajie Road, Fengtai District, Beijing, 100071, China.

出版信息

BMC Infect Dis. 2020 Jan 28;20(1):79. doi: 10.1186/s12879-019-4750-4.

Abstract

BACKGROUND

Mycoplasma pneumoniae is one of the most common causative pathogens of community-acquired pneumonia (CAP), accounting for as many as 30-50% of CAP during peak years. An early and rapid diagnostic method is key for guiding clinicians in their choice of antibiotics.

METHODS

The recombinase-aided amplification (RAA) assay is a recently developed, rapid detection method that has been used for the detection of several pathogens. The assays were performed in a one-step single tube reaction at 39° Celsius within 15-30 min. In this study, we established an RAA assay for M. pneumoniae using clinical specimens for validation and commercial real-time PCR as the reference method.

RESULTS

The analytical sensitivity of the RAA assay was 2.23 copies per reaction, and no cross-reactions with any of the other 15 related respiratory bacterial pathogens were observed. Compared with the commercial real-time PCR assay used when testing 311 respiratory specimens, the RAA assay obtained 100% sensitivity and 100% specificity with a kappa value of 1.

CONCLUSIONS

These results demonstrate that the proposed RAA assay will be of benefit as a faster, sensitive, and specific alternative tool for the detection of M. pneumoniae.

摘要

背景

肺炎支原体是社区获得性肺炎(CAP)最常见的病原体之一,在高发年份,CAP 中多达 30-50%是由肺炎支原体引起的。早期、快速的诊断方法对于指导临床医生选择抗生素至关重要。

方法

重组酶辅助扩增(RAA)检测法是一种新开发的快速检测方法,已用于检测多种病原体。检测在 39°C 的一步单管反应中进行,15-30 分钟内即可完成。在这项研究中,我们使用临床标本建立了肺炎支原体的 RAA 检测法进行验证,并以商业实时 PCR 检测法作为参考方法。

结果

RAA 检测法的分析灵敏度为每反应 2.23 拷贝,与其他 15 种相关呼吸道细菌病原体均无交叉反应。与用于检测 311 份呼吸道标本的商业实时 PCR 检测法相比,RAA 检测法的敏感性和特异性均为 100%,kappa 值为 1。

结论

这些结果表明,所提出的 RAA 检测法将成为一种更快、更敏感、更特异的检测肺炎支原体的替代工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bdef/6988361/394812799150/12879_2019_4750_Fig1_HTML.jpg

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