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3D digital anatomic angioarchitecture of the mouse brain using synchrotron-radiation-based propagation phase-contrast imaging.利用基于同步辐射的传播相位对比成像技术对小鼠大脑进行 3D 数字解剖血管造影。
J Synchrotron Radiat. 2019 Sep 1;26(Pt 5):1742-1750. doi: 10.1107/S160057751900674X. Epub 2019 Jul 12.
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Rapamycin Increases Collateral Circulation in Rodent Brain after Focal Ischemia as detected by Multiple Modality Dynamic Imaging.雷帕霉素通过多种模态动态成像检测增加局灶性脑缺血后啮齿动物的侧支循环。
Theranostics. 2019 Jul 9;9(17):4923-4934. doi: 10.7150/thno.32676. eCollection 2019.
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Phase-contrast computed tomography: A correlation study between portal pressure and three dimensional microvasculature of ex vivo liver samples from carbon tetrachloride-induced liver fibrosis in rats.相位对比计算机断层扫描:四氯化碳诱导的大鼠肝纤维化模型中门静脉压力与离体肝样本三维微血管的相关性研究。
Microvasc Res. 2019 Sep;125:103884. doi: 10.1016/j.mvr.2019.103884. Epub 2019 Jun 7.
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An iterative image reconstruction algorithm combined with forward and backward diffusion filtering for in-line X-ray phase-contrast computed tomography.一种结合前向和后向扩散滤波的迭代图像重建算法,用于在线X射线相衬计算机断层扫描。
J Synchrotron Radiat. 2018 Sep 1;25(Pt 5):1450-1459. doi: 10.1107/S1600577518009219. Epub 2018 Aug 9.
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Effect of SR-microCT radiation on the mechanical integrity of trabecular bone using in situ mechanical testing and digital volume correlation.基于原位力学测试和数字体视学的 SR-微 CT 辐射对小梁骨机械完整性的影响。
J Mech Behav Biomed Mater. 2018 Dec;88:109-119. doi: 10.1016/j.jmbbm.2018.08.012. Epub 2018 Aug 16.
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Cellular-resolution 3D virtual histology of human coronary arteries using x-ray phase tomography.利用 X 射线相衬断层成像术对人体冠状动脉进行细胞分辨率的 3D 虚拟组织学研究。
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High-Resolution X-Ray Phase-Contrast 3-D Imaging of Breast Tissue Specimens as a Possible Adjunct to Histopathology.高分辨率 X 射线相衬三维成像在乳腺组织标本中的应用——可能作为组织病理学的辅助手段。
IEEE Trans Med Imaging. 2018 Dec;37(12):2642-2650. doi: 10.1109/TMI.2018.2845905. Epub 2018 Jun 11.
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A Sparse-View CT Reconstruction Method Based on Combination of DenseNet and Deconvolution.基于 DenseNet 和去卷积组合的稀疏视图 CT 重建方法。
IEEE Trans Med Imaging. 2018 Jun;37(6):1407-1417. doi: 10.1109/TMI.2018.2823338.
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3D Imaging and Quantitative Analysis of Vascular Networks: A Comparison of Ultramicroscopy and Micro-Computed Tomography.三维成像和血管网络定量分析:超微镜与微计算机断层扫描的比较。
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Deep Convolutional Neural Network for Inverse Problems in Imaging.基于深度卷积神经网络的医学影像反问题研究
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使用一种用于基于传播的X射线相衬成像的新型CT重建算法,从少量投影数据实现微血管的三维可视化。

Three-dimensional visualization of microvasculature from few-projection data using a novel CT reconstruction algorithm for propagation-based X-ray phase-contrast imaging.

作者信息

Zhao Yuqing, Ji Dongjiang, Li Yimin, Zhao Xinyan, Lv Wenjuan, Xin Xiaohong, Han Shuo, Hu Chunhong

机构信息

School of Biomedical Engineering and Technology, Tianjin Medical University, Tianjin 300070, China.

The School of Science, Tianjin University of Technology and Education, Tianjin 300222, China.

出版信息

Biomed Opt Express. 2019 Dec 20;11(1):364-387. doi: 10.1364/BOE.380084. eCollection 2020 Jan 1.

DOI:10.1364/BOE.380084
PMID:32010522
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6968748/
Abstract

Propagation-based X-ray phase-contrast imaging (PBI) is a powerful nondestructive imaging technique that can reveal the internal detailed structures in weakly absorbing samples. Extending PBI to CT (PBCT) enables high-resolution and high-contrast 3D visualization of microvasculature, which can be used for the understanding, diagnosis and therapy of diseases involving vasculopathy, such as cardiovascular disease, stroke and tumor. However, the long scan time for PBCT impedes its wider use in biomedical and preclinical microvascular studies. To address this issue, a novel CT reconstruction algorithm for PBCT is presented that aims at shortening the scan time for microvascular samples by reducing the number of projections while maintaining the high quality of reconstructed images. The proposed algorithm combines the filtered backprojection method into the iterative reconstruction framework, and a weighted guided image filtering approach (WGIF) is utilized to optimize the intermediate reconstructed images. Notably, the homogeneity assumption on the microvasculature sample is adopted as prior knowledge, and therefore, a prior image of microvasculature structures can be acquired by a k-means clustering approach. Then, the prior image is used as the guided image in the WGIF procedure to effectively suppress streaking artifacts and preserve microvasculature structures. To evaluate the effectiveness and capability of the proposed algorithm, simulation experiments on 3D microvasculature numerical phantom and real experiments with CT reconstruction on the microvasculature sample are performed. The results demonstrate that the proposed algorithm can, under noise-free and noisy conditions, significantly reduce the artifacts and effectively preserve the microvasculature structures on the reconstructed images and thus enables it to be used for clear and accurate 3D visualization of microvasculature from few-projection data. Therefore, for 3D visualization of microvasculature, the proposed algorithm can be considered an effective approach for reducing the scan time required by PBCT.

摘要

基于传播的X射线相衬成像(PBI)是一种强大的无损成像技术,能够揭示弱吸收样品的内部详细结构。将PBI扩展到CT(PBCT)可实现微血管的高分辨率和高对比度三维可视化,可用于理解、诊断和治疗涉及血管病变的疾病,如心血管疾病、中风和肿瘤。然而,PBCT的长时间扫描阻碍了其在生物医学和临床前微血管研究中的更广泛应用。为了解决这个问题,提出了一种用于PBCT的新型CT重建算法,旨在通过减少投影数量来缩短微血管样品的扫描时间,同时保持重建图像的高质量。所提出的算法将滤波反投影方法结合到迭代重建框架中,并利用加权引导图像滤波方法(WGIF)优化中间重建图像。值得注意的是,采用微血管样品的均匀性假设作为先验知识,因此,可以通过k均值聚类方法获取微血管结构的先验图像。然后,将该先验图像用作WGIF过程中的引导图像,以有效抑制条纹伪影并保留微血管结构。为了评估所提出算法的有效性和能力,对三维微血管数值模型进行了模拟实验,并对微血管样品进行了CT重建的实际实验。结果表明,所提出的算法在无噪声和有噪声条件下,都能显著减少伪影,并有效地保留重建图像上的微血管结构,从而能够从少投影数据中清晰准确地实现微血管的三维可视化。因此,对于微血管的三维可视化,所提出的算法可被视为一种减少PBCT所需扫描时间的有效方法。