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水平获得的异种沉默子同源物:质粒、噬菌体和基因组岛编码的基因表达调节剂。

Horizontally Acquired Homologs of Xenogeneic Silencers: Modulators of Gene Expression Encoded by Plasmids, Phages and Genomic Islands.

机构信息

Millennium Institute on Immunology and Immunotherapy, Departamento de Genética Molecular y Microbiología, Facultad de Ciencias Biológicas, Pontificia Universidad Católica de Chile, 8331010 Santiago, Chile.

Departamento de Endocrinología, Facultad de Medicina, Pontificia Universidad Católica de Chile, 8331010 Santiago, Chile.

出版信息

Genes (Basel). 2020 Jan 29;11(2):142. doi: 10.3390/genes11020142.

Abstract

Acquisition of mobile elements by horizontal gene transfer can play a major role in bacterial adaptation and genome evolution by providing traits that contribute to bacterial fitness. However, gaining foreign DNA can also impose significant fitness costs to the host bacteria and can even produce detrimental effects. The efficiency of horizontal acquisition of DNA is thought to be improved by the activity of xenogeneic silencers. These molecules are a functionally related group of proteins that possess affinity for the acquired DNA. Binding of xenogeneic silencers suppresses the otherwise uncontrolled expression of genes from the newly acquired nucleic acid, facilitating their integration to the bacterial regulatory networks. Even when the genes encoding for xenogeneic silencers are part of the core genome, homologs encoded by horizontally acquired elements have also been identified and studied. In this article, we discuss the current knowledge about horizontally acquired xenogeneic silencer homologs, focusing on those encoded by genomic islands, highlighting their distribution and the major traits that allow these proteins to become part of the host regulatory networks.

摘要

通过水平基因转移获得移动元件可以通过提供有助于细菌适应性和基因组进化的特征,在细菌适应和基因组进化中发挥重要作用。然而,获得外源 DNA 也会给宿主细菌带来巨大的适应成本,甚至会产生有害影响。人们认为,异源沉默子的活性可以提高 DNA 的水平获取效率。这些分子是一组具有功能相关性的蛋白质,它们与获得的 DNA 具有亲和力。异源沉默子的结合抑制了新获得的核酸中基因的不受控制表达,从而促进了它们整合到细菌的调控网络中。即使编码异源沉默子的基因是核心基因组的一部分,也已经鉴定和研究了由水平获得的元件编码的同源物。本文讨论了关于水平获得的异源沉默子同源物的现有知识,重点介绍了那些由基因组岛编码的同源物,强调了它们的分布和允许这些蛋白质成为宿主调控网络一部分的主要特征。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6c00/7074111/5a515a73b10b/genes-11-00142-g001.jpg

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