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葡萄中检测到的一种新型疑似杆状病毒的全基因组序列。

Complete genome sequence of a novel putative polerovirus detected in grapevine.

机构信息

Grape and Persimmon Research Station, Institute of Fruit Tree and Tea Science, National Agriculture and Food Research Organization (NARO), Akitsu, Higashihiroshima, Hiroshima, 739-2494, Japan.

出版信息

Arch Virol. 2020 Apr;165(4):1007-1010. doi: 10.1007/s00705-020-04544-3. Epub 2020 Feb 10.

Abstract

Next-generation sequencing detected a novel virus from grapevine cultivar 'Kishmish Chjornyj' from Russia. Its complete genome sequence of 5625 nucleotides includes seven open reading frames encoding seven putative proteins similar to those of members of the genus Polerovirus in the family Luteoviridae. The novel virus showed graft-transmissibility and was tentatively named "grapevine polerovirus 1" (GPoV-1). Phylogenetic analysis using complete genome sequences of GPoV-1 and members of the family Luteoviridae indicated that although GPoV-1 is a member of the genus Polerovirus, it is unique within its clade. GPoV-1 is the first polerovirus detected in grapevine.

摘要

下一代测序从俄罗斯的葡萄品种“Kishmish Chjornyj”中检测到一种新型病毒。其全长 5625 个核苷酸的基因组序列包含七个开放阅读框,编码七种类似杆状病毒科卢特病毒属成员的推定蛋白。新型病毒表现出嫁接传染性,被暂时命名为“葡萄潜隐病毒 1”(GPoV-1)。使用 GPoV-1 的全长基因组序列和卢特病毒科成员的系统发育分析表明,尽管 GPoV-1 是杆状病毒属的成员,但它在其分支内是独特的。GPoV-1 是在葡萄中检测到的第一种潜隐病毒。

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