Biotechnology Research Center, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Laboratory for Chemistry and Life Science Institute of Innovative Research, Tokyo Institute of Technology, Midori-ku, Yokohama, Japan.
Nat Chem Biol. 2020 Apr;16(4):415-422. doi: 10.1038/s41589-019-0461-9. Epub 2020 Feb 10.
In biotin biosynthesis, the conversion of pimeloyl intermediates to biotin is catalyzed by a universal set of four enzymes: BioF, BioA, BioD and BioB. We found that the gene homologous to bioA, the product of which is involved in the conversion of 8-amino-7-oxononanoate (AON) to 7,8-diaminononanoate (DAN), is missing in the genome of the cyanobacterium Synechocystis sp. PCC 6803. We provide structural and biochemical evidence showing that a novel dehydrogenase, BioU, is involved in biotin biosynthesis and functionally replaces BioA. This enzyme catalyzes three reactions: formation of covalent linkage with AON to yield a BioU-DAN conjugate at the ε-amino group of Lys124 of BioU using NAD(P)H, carboxylation of the conjugate to form BioU-DAN-carbamic acid, and release of DAN-carbamic acid using NAD(P). In this biosynthetic pathway, BioU is a suicide enzyme that loses the Lys124 amino group after a single round of reaction.
在生物素生物合成中,由一组通用的四种酶:BioF、BioA、BioD 和 BioB 催化将 pimeloyl 中间体转化为生物素。我们发现,产生活性转化 8-氨基-7-氧代壬酸(AON)为 7,8-二氨基壬酸(DAN)的产物的 bioA 基因在蓝藻集胞藻 PCC 6803 的基因组中缺失。我们提供结构和生化证据表明,一种新型的脱氢酶 BioU 参与生物素生物合成,并在功能上替代了 BioA。该酶催化三个反应:用 NAD(P)H 在 BioU 的 Lys124 的ε-氨基上与 AON 形成共价键,生成 BioU-DAN 缀合物,然后将缀合物羧化形成 BioU-DAN-氨基甲酸,最后用 NAD(P)释放 DAN-氨基甲酸。在这个生物合成途径中,BioU 是一种自杀酶,在单个反应循环后失去 Lys124 氨基。