Department of Radiology and Biomedical Imaging, University of California, San Francisco, California.
University of California, San Francisco, and University of California, Berkeley, Joint Graduate Group in Bioengineering, California.
Magn Reson Med. 2020 Sep;84(3):1376-1390. doi: 10.1002/mrm.28210. Epub 2020 Feb 14.
To develop an automated pipeline based on convolutional neural networks to segment lumbar intervertebral discs and characterize their biochemical composition using voxel-based relaxometry, and establish local associations with clinical measures of disability, muscle changes, and other symptoms of lower back pain.
This work proposes a new methodology using MRI (n = 31, across the spectrum of disc degeneration) that combines deep learning-based segmentation, atlas-based registration, and statistical parametric mapping for voxel-based analysis of T and T relaxation time maps to characterize disc degeneration and its associated disability.
Across degenerative grades, the segmentation algorithm produced accurate, high-confidence segmentations of the lumbar discs in two independent data sets. Manually and automatically extracted mean disc T and T relaxation times were in high agreement for all discs with minimal bias. On a voxel-by-voxel basis, imaging-based degenerative grades were strongly negatively correlated with T and T , particularly in the nucleus. Stratifying patients by disability grades revealed significant differences in the relaxation maps between minimal/moderate versus severe disability: The average T relaxation maps from the minimal/moderate disability group showed clear annulus nucleus distinction with a visible midline, whereas the severe disability group had lower average T values with a homogeneous distribution.
This work presented a scalable pipeline for fast, automated assessment of disc relaxation times, and voxel-based relaxometry that overcomes limitations of current region of interest-based analysis methods and may enable greater insights and associations between disc degeneration, disability, and lower back pain.
开发一种基于卷积神经网络的自动化流水线,使用体素弛豫度法定量分析腰椎间盘,并对其生化成分进行特征描述,同时建立与残疾、肌肉变化和其他腰痛症状的临床测量值的局部关联。
本研究提出了一种新的方法,使用 MRI(n=31,涵盖椎间盘退变的整个范围),将基于深度学习的分割、基于图谱的配准和基于统计参数映射的体素分析相结合,用于 T1 和 T2 弛豫时间图的分析,以对椎间盘退变及其相关的残疾进行特征描述。
在两个独立的数据集中,分割算法对腰椎间盘进行了准确、高可信度的分割,跨越了退行性病变的各个等级。手动和自动提取的平均椎间盘 T1 和 T2 弛豫时间在所有椎间盘上都具有高度一致性,且偏差最小。在体素水平上,基于影像学的退行性病变等级与 T1 和 T2 呈强烈的负相关,特别是在核内。根据残疾等级对患者进行分层,发现严重残疾组的弛豫图与轻微/中度残疾组之间存在显著差异:轻微/中度残疾组的平均 T1 弛豫图显示出清晰的环核区分,并有可见的中线,而严重残疾组的 T1 值较低,呈均匀分布。
本研究提出了一种用于快速、自动评估椎间盘弛豫时间的可扩展流水线,以及基于体素的弛豫度计方法,克服了当前基于感兴趣区域的分析方法的局限性,可能为椎间盘退变、残疾和腰痛之间的关联提供更深入的见解。