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麻疯树热休克转录因子基因家族的全基因组分析与表达谱分析

Genome-wide analysis and expression profiling of the heat shock transcription factor gene family in Physic Nut ( L.).

作者信息

Zhang Lin, Chen Wei, Shi Ben

机构信息

School of Environmental Engineering and Chemistry, Luoyang Institute of Science and Technology, Luoyang, Henan, China.

出版信息

PeerJ. 2020 Feb 5;8:e8467. doi: 10.7717/peerj.8467. eCollection 2020.

Abstract

The heat shock transcription factor (Hsf) family, identified as one of the important gene families, participates in plant development process and some stress response. So far, there have been no reports on the research of the transcription factors in physic nut. In this study, seventeen putative genes identified from physic nut genome. Phylogenetic analysis manifested these genes classified into three groups: A, B and C. Chromosomal location showed that they distributed eight out of eleven linkage groups. Expression profiling indicated that fourteen genes highly expressed in different tissues except , and . In addition, induction of six and twelve genes noted against salt stress and drought stress, respectively, which demonstrated that the genes are involved in abiotic stress responses. Our results contribute to a better understanding of the gene family and further study of its function.

摘要

热激转录因子(Hsf)家族是重要的基因家族之一,参与植物发育过程及一些应激反应。迄今为止,关于麻风树转录因子的研究尚无报道。在本研究中,从麻风树基因组中鉴定出17个假定基因。系统发育分析表明,这些基因分为A、B和C三组。染色体定位显示它们分布在11个连锁群中的8个上。表达谱分析表明,除了[具体基因名称缺失]、[具体基因名称缺失]和[具体基因名称缺失]外,14个基因在不同组织中高表达。此外,分别有6个和12个基因在盐胁迫和干旱胁迫下被诱导表达,这表明这些基因参与非生物胁迫反应。我们的结果有助于更好地理解[具体基因名称缺失]基因家族及其功能的进一步研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e94a/7007736/422cc174535e/peerj-08-8467-g001.jpg

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