AMOLF, Amsterdam, The Netherlands.
Rowland Institute at Harvard University, Cambridge, MA, USA.
Nature. 2020 Feb;578(7796):588-592. doi: 10.1038/s41586-020-2033-2. Epub 2020 Feb 19.
Elucidating elementary mechanisms that underlie bacterial diversity is central to ecology and microbiome research. Bacteria are known to coexist by metabolic specialization, cooperation and cyclic warfare. Many species are also motile, which is studied in terms of mechanism, benefit, strategy, evolution and ecology. Indeed, bacteria often compete for nutrient patches that become available periodically or by random disturbances. However, the role of bacterial motility in coexistence remains unexplored experimentally. Here we show that-for mixed bacterial populations that colonize nutrient patches-either population outcompetes the other when low in relative abundance. This inversion of the competitive hierarchy is caused by active segregation and spatial exclusion within the patch: a small fast-moving population can outcompete a large fast-growing population by impeding its migration into the patch, while a small fast-growing population can outcompete a large fast-moving population by expelling it from the initial contact area. The resulting spatial segregation is lost for weak growth-migration trade-offs and a lack of virgin space, but is robust to population ratio, density and chemotactic ability, and is observed in both laboratory and wild strains. These findings show that motility differences and their trade-offs with growth are sufficient to promote diversity, and suggest previously undescribed roles for motility in niche formation and collective expulsion-containment strategies beyond individual search and survival.
阐明细菌多样性的基本机制是生态学和微生物组研究的核心。众所周知,细菌通过代谢特化、合作和循环战争共存。许多物种也是能动的,这在机制、效益、策略、进化和生态学方面都有研究。事实上,细菌经常为周期性或随机干扰而提供的营养斑块竞争。然而,细菌运动性在共存中的作用在实验上仍未得到探索。在这里,我们表明对于在营养斑块上定殖的混合细菌种群,当相对丰度较低时,一个种群会胜过另一个种群。这种竞争层次的颠倒是由斑块内的主动分离和空间排斥引起的:一个小的快速运动的种群可以通过阻碍其向斑块内迁移来战胜一个大的快速生长的种群,而一个小的快速生长的种群可以通过将其逐出初始接触区域来战胜一个大的快速运动的种群。对于弱生长-迁移权衡和缺乏处女空间,这种导致的空间分离会丢失,但对于种群比例、密度和趋化能力是稳健的,并且在实验室和野生菌株中都观察到了这种现象。这些发现表明,运动性差异及其与生长的权衡足以促进多样性,并表明运动性在生态位形成和集体驱逐-包含策略方面的作用,超出了个体搜索和生存的作用。