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罗马尼亚特兰西瓦尼亚的 HLA 多态性和单倍型多样性。

HLA Polymorphisms and Haplotype Diversity in Transylvania, Romania.

机构信息

Department of Cell and Molecular Biology, "Iuliu Haţieganu" University of Medicine and Pharmacy, 6 Pasteur Street, 400 349 Cluj-Napoca, Romania.

Legal Medicine Institute Cluj-Napoca, 3-5 Clinicilor Street, 400 006 Cluj-Napoca, Romania.

出版信息

J Immunol Res. 2019 Dec 30;2019:1342762. doi: 10.1155/2019/1342762. eCollection 2019.

DOI:10.1155/2019/1342762
PMID:32083138
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7012258/
Abstract

Transylvania is a historical region in the northwestern part of Romanian with a rather heterogeneous population. Our study is the first to determine human leukocyte antigen (HLA) profiles in a large population sample from this region and to compare them with other European population groups. HLA genes were examined in 2,794 individuals using the Single Specific Primer-Polymerase Chain Reaction (SSP-PCR) and Polymerase Chain Reaction Sequence-Specific Oligonucleotide (PCR-SSO) methods. All samples were tested for the HLA-A locus, 2,773 for HLA-B, 1,847 for HLA-C, and 2,719 for HLA-DRB1 loci. HLA gene frequency data from several European population groups (as presented in studies involving more than 1,000 individuals) served as reference in comparison with the local sample. The distribution of HLA genes in the studied population group was heterogeneous, as the Hardy-Weinberg equilibrium was statistically significant ( value < 0.01). The most common genes found in our sample group were A02 (0.27%), B35 (0.14%), C07 (0.25%), and DRB111 (0.19%). The most common haplotype was A01B08C07~DRB103 (1.26% in 1,770 individuals with complete data). This analysis confirmed the known heterogeneity of the Transylvanian population. The study indicates that the European population groups located in close vicinity (those from Serbia, Hungary, Wallachia, and Croatia) are genetically closest to the Transylvanian population.

摘要

特兰西瓦尼亚是罗马尼亚西北部的一个历史地区,其人口结构相当复杂。本研究首次对该地区的大量人群样本进行人类白细胞抗原(HLA)分析,并与其他欧洲人群进行比较。使用单特异性引物聚合酶链反应(SSP-PCR)和聚合酶链反应序列特异性寡核苷酸(PCR-SSO)方法对 2794 个人的 HLA 基因进行了检测。所有样本均进行了 HLA-A 基因座检测,2773 个样本进行了 HLA-B 基因座检测,1847 个样本进行了 HLA-C 基因座检测,2719 个样本进行了 HLA-DRB1 基因座检测。本研究将几个欧洲人群(涉及超过 1000 人的研究)的 HLA 基因频率数据作为参考,与当地样本进行比较。研究人群的 HLA 基因分布存在异质性,因为 Hardy-Weinberg 平衡具有统计学意义(<0.01)。在我们的样本组中,最常见的基因是 A02(0.27%)、B35(0.14%)、C07(0.25%)和 DRB111(0.19%)。最常见的单倍型是 A01B08C07~DRB103(1770 名具有完整数据的个体中占 1.26%)。该分析证实了特兰西瓦尼亚人群的已知异质性。研究表明,与特兰西瓦尼亚人群遗传关系最近的是地理位置相近的欧洲人群(来自塞尔维亚、匈牙利、瓦拉几亚和克罗地亚的人群)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9b6/7012258/3ab4c6a5c491/JIR2019-1342762.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9b6/7012258/4f0b4cf4e69a/JIR2019-1342762.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9b6/7012258/3ab4c6a5c491/JIR2019-1342762.002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9b6/7012258/4f0b4cf4e69a/JIR2019-1342762.001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a9b6/7012258/3ab4c6a5c491/JIR2019-1342762.002.jpg

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