Ocean Genome Legacy Center, Northeastern University, Nahant, MA, USA.
School of Biological Sciences, University of Portsmouth, Portsmouth, UK.
Int J Syst Evol Microbiol. 2020 Apr;70(4):2388-2394. doi: 10.1099/ijsem.0.004049. Epub 2020 Feb 20.
A cellulolytic, aerobic, gammaproteobacterium, designated strain Bs02, was isolated from the gills of a marine wood-boring mollusc, (Bivalvia: Teredinidae). The cells are Gram-stain-negative, slightly curved motile rods (2-5×0.4-0.6 µm) that bear a single polar flagellum and are capable of heterotrophic growth in a simple mineral medium supplemented with cellulose as a sole source of carbon and energy. Cellulose, carboxymethylcellulose, xylan, cellobiose and a variety of sugars also support growth. Strain Bs02 requires combined nitrogen for growth. Temperature, pH and salinity optima (range) for growth were 20 °C (range, 10-30 °C), 8.0 (pH 6.5-8.5) and 0.5 M NaCl (range, 0.0-0.8 M), respectively when grown on 0.5 % (w/v) galactose. Strain Bs02 does not require magnesium and calcium ion concentrations reflecting the proportions found in seawater. The genome size is approximately 4.03 Mbp and the DNA G+C content of the genome is 47.8 mol%. Phylogenetic analyses based on 16S rRNA gene sequences, and on conserved protein-coding sequences, show that strain Bs02 forms a well-supported clade with . Average nucleotide identity and percentage of conserved proteins differentiate strain Bs02 from at threshold values exceeding those proposed to distinguish bacterial species but not genera. These results indicate that strain Bs02 represents a novel species in the previously monotypic genus for which the name sp. nov. is proposed. The strain has been deposited under accession numbers ATCC TSD-120 and KCTC 62963.
一株好氧、能分解纤维素的γ-变形菌,被命名为 Bs02 菌株,从海洋蛀木双壳类软体动物(双壳类:蛀船蛤科)的鳃中分离得到。细胞革兰氏染色阴性,轻度弯曲的运动杆(2-5×0.4-0.6μm),单极鞭毛,能够在简单的矿物培养基中异养生长,补充纤维素作为唯一的碳源和能源。纤维素、羧甲基纤维素、木聚糖、纤维二糖和各种糖也支持生长。Bs02 菌株的生长需要复合氮。在 0.5%(w/v)半乳糖上生长时,其生长的最适温度、pH 和盐度范围分别为 20℃(10-30℃)、8.0(pH 6.5-8.5)和 0.5 M NaCl(0.0-0.8 M)。菌株 Bs02 生长不需要镁和钙离子浓度,反映了海水中的比例。基因组大小约为 4.03 Mbp,基因组的 DNA G+C 含量为 47.8 mol%。基于 16S rRNA 基因序列和保守蛋白编码序列的系统发育分析表明,Bs02 菌株与 形成一个支持良好的分支。平均核苷酸同一性和保守蛋白的百分比将 Bs02 菌株与 区分开来,其阈值超过了用于区分细菌种但不区分属的阈值。这些结果表明,Bs02 菌株代表了先前单型属 中的一个新种,建议使用 sp. nov. 作为其名称。该菌株已保藏于 ATCC TSD-120 和 KCTC 62963 号。