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翁氏拟硫弯菌属,新属,一种化学自养硫酸盐还原菌,分离自印度洋翁氏热液区,以及将塞内加尔脱硫弧菌重新分类为翁氏拟硫弯菌复合种。

Paradesulfovibrio onnuriensis gen. nov., sp. nov., a chemolithoautotrophic sulfate-reducing bacterium isolated from the Onnuri vent field of the Indian Ocean and reclassification of Desulfovibrio senegalensis as Paradesulfovibrio senegalensis comb. nov.

机构信息

Korea Institute of Ocean Science and Technology, Busan, 49111, Republic of Korea.

KIOST School, University of Science and Technology, Daejeon, 34113, Republic of Korea.

出版信息

J Microbiol. 2020 Apr;58(4):252-259. doi: 10.1007/s12275-020-9376-0. Epub 2020 Feb 27.

Abstract

An anaerobic, rod-shaped, mesophilic, chemolithoautotrophic, sulfate-reducing bacterial strain IOR2 was isolated from a newly found deep-sea hydrothermal vent (OVF, Onnuri Vent Field) area in the central Indian Ocean ridge (11°24'88″ S 66°25'42″ E, 2021 m water depth). The 16S rRNA gene sequence analysis revealed that the strain IOR2 was most closely related to Desulfovibrio senegalensis BLaC1 (96.7%). However, it showed low similarity with the members of the family Desulfovibrionaceae, such as Desulfovibrio tunisiensis RB22 (94.0%), D. brasiliensis LVform1 (93.9%), D. halophilus DSM 5663 (93.7%), and Pseudodesulfovibrio aespoeensis Aspo-2 (93.2%). The strain IOR2 could grow at 23-42°C (optimum 37°C), pH 5.0-8.0 (optimum pH 7.0) and with 0.5-6.5% (optimum 3.0%) NaCl. The strain could use lactate, pyruvate, H, and glycerol as electron donors and sulfate, thiosulfate, and sulfite as electron acceptors. The major fatty acids of the strain IOR2 were iso-C, iso-C, ante-iso-C, and summed feature 9 (C methyl/iso-Cω9c). Both the strains IOR2 and BLaC1 could grow with CO and H as the sole sources of carbon and energy, respectively. Genomic evidence for the Wood-Ljungdahl pathway in both the strains reflects chemolithoautotrophic growth. The DNA G + C content of the strain IOR2 and BLaC1 was 58.1-60.5 mol%. Based on the results of the phylogenetic and physiologic studies, Paradesulfovibrio onnuriensis gen. nov., sp. nov. with the type strain IOR2 (= KCTC 15845 = MCCC 1K04559) was proposed to be a member of the family Desulfovibrionaceae. We have also proposed the reclassification of D. senegalensis as Paradesulfovibrio senegalensis comb. nov.

摘要

一株新发现的深海热液喷口(OVF,Onnuri 喷口场)中分离到的厌氧、杆状、嗜中温、化能自养、硫酸盐还原细菌 IOR2 菌株,位于印度洋中脊(11°24'88″ S 66°25'42″ E,水深 2021 米)。16S rRNA 基因序列分析表明,菌株 IOR2 与 Senegalensis BLaC1(96.7%)最为密切相关。然而,它与 Desulfovibrionaceae 家族的成员如 Tunisiensis RB22(94.0%)、Brasiliensis LVform1(93.9%)、Halophilus DSM 5663(93.7%)和 Pseudodesulfovibrio aespoeensis Aspo-2(93.2%)的相似度较低。菌株 IOR2 可在 23-42°C(最佳 37°C)、pH5.0-8.0(最佳 pH7.0)和 0.5-6.5%(最佳 3.0%)NaCl 下生长。该菌株可利用乳酸盐、丙酮酸盐、H 和甘油作为电子供体,硫酸盐、硫代硫酸盐和亚硫酸盐作为电子受体。菌株 IOR2 的主要脂肪酸为 iso-C、iso-C、ante-iso-C 和总和特征 9(C 甲基/iso-Cω9c)。IOR2 株和 BLaC1 株均可分别以 CO 和 H 作为唯一的碳源和能源进行生长。两株菌的基因组证据均表明 Wood-Ljungdahl 途径为化能自养生长。菌株 IOR2 和 BLaC1 的 DNA G + C 含量为 58.1-60.5mol%。基于系统发育和生理研究结果,提出了一个新的属 Paradesulfovibrio onnuriensis gen. nov.,sp. nov.,其模式菌株为 IOR2(=KCTC 15845=MCCC 1K04559),属于 Desulfovibrionaceae 家族。我们还建议将 Senegalensis 重新分类为 Paradesulfovibrio senegalensis comb. nov.

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