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结构证据表明, latch 机制调节了 SufS 家族半胱氨酸脱硫酶活性位点的可及性。

Structural evidence for a latch mechanism regulating access to the active site of SufS-family cysteine desulfurases.

机构信息

Department of Chemistry and Biochemistry, University of Alabama, 250 Hackberry Lane, Tuscaloosa, AL 35401, USA.

出版信息

Acta Crystallogr D Struct Biol. 2020 Mar 1;76(Pt 3):291-301. doi: 10.1107/S2059798320000790. Epub 2020 Feb 25.

DOI:10.1107/S2059798320000790
PMID:32133993
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7057215/
Abstract

Cysteine serves as the sulfur source for the biosynthesis of Fe-S clusters and thio-cofactors, molecules that are required for core metabolic processes in all organisms. Therefore, cysteine desulfurases, which mobilize sulfur for its incorporation into thio-cofactors by cleaving the C-S bond of cysteine, are ubiquitous in nature. SufS, a type 2 cysteine desulfurase that is present in plants and microorganisms, mobilizes sulfur from cysteine to the transpersulfurase SufE to initiate Fe-S biosynthesis. Here, a 1.5 Å resolution X-ray crystal structure of the Escherichia coli SufS homodimer is reported which adopts a state in which the two monomers are rotated relative to their resting state, displacing a β-hairpin from its typical position blocking transpersulfurase access to the SufS active site. A global structure and sequence analysis of SufS family members indicates that the active-site β-hairpin is likely to require adjacent structural elements to function as a β-latch regulating access to the SufS active site.

摘要

半胱氨酸是生物体内铁硫簇和硫辅因子生物合成的硫源,这些分子是所有生物核心代谢过程所必需的。因此,半胱氨酸脱硫酶在自然界中普遍存在,它们通过切断半胱氨酸的 C-S 键将硫转移到硫辅因子中。SufS 是一种存在于植物和微生物中的 2 型半胱氨酸脱硫酶,它将硫从半胱氨酸转移到转硫酶 SufE 上,从而启动 Fe-S 生物合成。本文报道了大肠杆菌 SufS 同源二聚体的 1.5 Å 分辨率 X 射线晶体结构,该结构采用了一种状态,其中两个单体相对于它们的静止状态旋转,将 β-发夹从其典型位置移动,从而阻止转硫酶进入 SufS 活性位点。对 SufS 家族成员的全局结构和序列分析表明,活性位点的 β-发夹可能需要相邻的结构元件作为 β-闩锁来调节进入 SufS 活性位点的通道。

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本文引用的文献

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Proc Natl Acad Sci U S A. 2019 Sep 24;116(39):19421-19430. doi: 10.1073/pnas.1909535116. Epub 2019 Sep 11.
2
Sulfation pathways from red to green.从红色到绿色的硫酸化途径。
J Biol Chem. 2019 Aug 16;294(33):12293-12312. doi: 10.1074/jbc.REV119.007422. Epub 2019 Jul 2.
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Direct observation of intermediates in the SufS cysteine desulfurase reaction reveals functional roles of conserved active-site residues.直接观察 SufS 半胱氨酸脱硫酶反应中的中间体揭示了保守活性位点残基的功能作用。
J Biol Chem. 2019 Aug 16;294(33):12444-12458. doi: 10.1074/jbc.RA119.009471. Epub 2019 Jun 27.
4
Structural Evidence for Dimer-Interface-Driven Regulation of the Type II Cysteine Desulfurase, SufS.结构证据表明二聚体界面驱动 II 型半胱氨酸脱硫酶 SufS 的调节。
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SIFTS: updated Structure Integration with Function, Taxonomy and Sequences resource allows 40-fold increase in coverage of structure-based annotations for proteins.SIFTS:更新后的结构整合功能、分类学和序列资源允许基于结构注释的蛋白质覆盖率增加 40 倍。
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