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大脑发育和衰老过程中基因表达异质性的时间变化。

Temporal changes in the gene expression heterogeneity during brain development and aging.

机构信息

Department of Biological Sciences, Middle East Technical University, 06800, Ankara, Turkey.

European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK.

出版信息

Sci Rep. 2020 Mar 5;10(1):4080. doi: 10.1038/s41598-020-60998-0.

Abstract

Cells in largely non-mitotic tissues such as the brain are prone to stochastic (epi-)genetic alterations that may cause increased variability between cells and individuals over time. Although increased inter-individual heterogeneity in gene expression was previously reported, whether this process starts during development or if it is restricted to the aging period has not yet been studied. The regulatory dynamics and functional significance of putative aging-related heterogeneity are also unknown. Here we address these by a meta-analysis of 19 transcriptome datasets from three independent studies, covering diverse human brain regions. We observed a significant increase in inter-individual heterogeneity during aging (20 + years) compared to postnatal development (0 to 20 years). Increased heterogeneity during aging was consistent among different brain regions at the gene level and associated with lifespan regulation and neuronal functions. Overall, our results show that increased expression heterogeneity is a characteristic of aging human brain, and may influence aging-related changes in brain functions.

摘要

在大脑等非有丝分裂组织中,细胞容易发生随机(表观)遗传改变,随着时间的推移,这些改变可能会导致细胞和个体之间的变异性增加。尽管先前已经报道了基因表达的个体间异质性增加,但这个过程是在发育过程中开始的,还是仅限于衰老期,尚未得到研究。假定与衰老相关的异质性的调节动态和功能意义也未知。在这里,我们通过对三个独立研究的 19 个转录组数据集进行荟萃分析来解决这些问题,这些数据集涵盖了不同的人类大脑区域。我们观察到,与出生后发育(0 至 20 岁)相比,衰老(20 岁以上)过程中的个体间异质性显著增加。在基因水平上,不同大脑区域的衰老过程中的异质性增加是一致的,并且与寿命调节和神经元功能有关。总的来说,我们的结果表明,表达异质性增加是衰老人类大脑的一个特征,并且可能会影响与衰老相关的大脑功能变化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b40/7058021/be91e81d6e27/41598_2020_60998_Fig1_HTML.jpg

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