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叶切蚁群体中的共进化:从叶切蚁群体到染色体末端

Co-evolution in the Jungle: From Leafcutter Ant Colonies to Chromosomal Ends.

机构信息

Department of Genetics, Faculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, 842 15, Bratislava, Slovakia.

Department of Biochemistry, Faculty of Natural Sciences, Comenius University in Bratislava, Ilkovičova 6, 842 15, Bratislava, Slovakia.

出版信息

J Mol Evol. 2020 May;88(4):293-318. doi: 10.1007/s00239-020-09935-3. Epub 2020 Mar 10.

Abstract

Biological entities are multicomponent systems where each part is directly or indirectly dependent on the others. In effect, a change in a single component might have a consequence on the functioning of its partners, thus affecting the fitness of the entire system. In this article, we provide a few examples of such complex biological systems, ranging from ant colonies to a population of amino acids within a single-polypeptide chain. Based on these examples, we discuss one of the central and still challenging questions in biology: how do such multicomponent consortia co-evolve? More specifically, we ask how telomeres, nucleo-protein complexes protecting the integrity of linear DNA chromosomes, originated from the ancestral organisms having circular genomes and thus not dealing with end-replication and end-protection problems. Using the examples of rapidly evolving topologies of mitochondrial genomes in eukaryotic microorganisms, we show what means of co-evolution were employed to accommodate various types of telomere-maintenance mechanisms in mitochondria. We also describe an unprecedented runaway evolution of telomeric repeats in nuclei of ascomycetous yeasts accompanied by co-evolution of telomere-associated proteins. We propose several scenarios derived from research on telomeres and supported by other studies from various fields of biology, while emphasizing that the relevant answers are still not in sight. It is this uncertainty and a lack of a detailed roadmap that makes the journey through the jungle of biological systems still exciting and worth undertaking.

摘要

生物实体是多组分系统,其中每个部分直接或间接地依赖于其他部分。实际上,单个组件的变化可能会对其合作伙伴的功能产生影响,从而影响整个系统的适应性。在本文中,我们提供了一些这样的复杂生物系统的示例,从蚁群到单个多肽链内的氨基酸群体。基于这些示例,我们讨论了生物学中一个核心且仍然具有挑战性的问题:这样的多组分联合体如何共同进化?更具体地说,我们询问端粒——保护线性 DNA 染色体完整性的核蛋白复合物——如何从具有圆形基因组的祖先生物起源,从而不处理末端复制和末端保护问题。我们使用真核微生物中线粒体基因组快速进化拓扑的例子,展示了在细胞器中采用了哪些共同进化的手段来适应各种类型的端粒维持机制。我们还描述了在子囊菌酵母的核中伴随着端粒相关蛋白的共同进化,端粒重复序列发生了前所未有的失控进化。我们提出了几个基于端粒研究并得到生物学其他领域研究支持的情景,同时强调相关答案仍未出现。正是这种不确定性和缺乏详细的路线图,使得在生物系统的丛林中探索仍然令人兴奋且值得一试。

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