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Generalizing RNA velocity to transient cell states through dynamical modeling.通过动态建模将 RNA 速度推广到瞬时细胞状态。
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ShinyGO: a graphical gene-set enrichment tool for animals and plants.ShinyGO:一个用于动植物的图形基因集富集工具。
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A positive feedback loop between Myc and aerobic glycolysis sustains tumor growth in a tumor model.Myc 与有氧糖酵解之间的正反馈循环维持肿瘤模型中的肿瘤生长。
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Cellular Immunity Against Parasitoid Wasps: A Complex and Time-Dependent Process.针对寄生蜂的细胞免疫:一个复杂且依赖时间的过程。
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Simu-dependent clearance of dying cells regulates macrophage function and inflammation resolution.依赖 Simu 的死亡细胞清除可调节巨噬细胞功能和炎症消退。
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The Exchangeable Apolipoprotein Nplp2 Sustains Lipid Flow and Heat Acclimation in Drosophila.载脂蛋白 Nplp2 可交换维持果蝇的脂质流动和热适应。
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Phagocytosis in Drosophila: From molecules and cellular machinery to physiology.果蝇中的吞噬作用:从分子和细胞机制到生理学。
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Planar-Polarized Semaphorin-5c and Plexin A Promote the Collective Migration of Epithelial Cells in Drosophila.平面偏振信号素 5c 和 Plexin A 促进果蝇上皮细胞的集体迁移。
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果蝇免疫细胞的时间特异性和异质性。

Temporal specificity and heterogeneity of Drosophila immune cells.

机构信息

Institut de Génétique et de Biologie Moléculaire et Cellulaire, Illkirch, France.

Centre National de la Recherche Scientifique, UMR7104, Illkirch, France.

出版信息

EMBO J. 2020 Jun 17;39(12):e104486. doi: 10.15252/embj.2020104486. Epub 2020 Mar 12.

DOI:10.15252/embj.2020104486
PMID:32162708
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7298292/
Abstract

Immune cells provide defense against non-self and have recently been shown to also play key roles in diverse processes such as development, metabolism, and tumor progression. The heterogeneity of Drosophila immune cells (hemocytes) remains an open question. Using bulk RNA sequencing, we find that the hemocytes display distinct features in the embryo, a closed and rapidly developing system, compared to the larva, which is exposed to environmental and metabolic challenges. Through single-cell RNA sequencing, we identify fourteen hemocyte clusters present in unchallenged larvae and associated with distinct processes, e.g., proliferation, phagocytosis, metabolic homeostasis, and humoral response. Finally, we characterize the changes occurring in the hemocyte clusters upon wasp infestation, which triggers the differentiation of a novel hemocyte type, the lamellocyte. This first molecular atlas of hemocytes provides insights and paves the way to study the biology of the Drosophila immune cells in physiological and pathological conditions.

摘要

免疫细胞提供了对非自身的防御,最近还被证明在多种过程中发挥关键作用,如发育、代谢和肿瘤进展。果蝇免疫细胞(血细胞)的异质性仍然是一个悬而未决的问题。使用批量 RNA 测序,我们发现与幼虫相比,在胚胎(一个封闭且快速发育的系统)中血细胞表现出不同的特征,幼虫暴露于环境和代谢挑战中。通过单细胞 RNA 测序,我们鉴定了在未受挑战的幼虫中存在的 14 个血细胞簇,并与不同的过程相关,例如增殖、吞噬作用、代谢稳态和体液反应。最后,我们描述了在黄蜂侵袭时血细胞簇发生的变化,这触发了一种新型血细胞类型,即浆细胞的分化。这个血细胞的第一个分子图谱提供了见解,并为研究果蝇免疫细胞在生理和病理条件下的生物学铺平了道路。