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核孔复合体介导的拟南芥基因表达。

Nuclear pore complex-mediated gene expression in Arabidopsis thaliana.

机构信息

Department of Environmental and Life Sciences, University of Shizuoka, Shizuoka, 422-8526, Japan.

出版信息

J Plant Res. 2020 Jul;133(4):449-455. doi: 10.1007/s10265-020-01177-0. Epub 2020 Mar 13.

DOI:10.1007/s10265-020-01177-0
PMID:32170459
Abstract

Nuclear pore complexes (NPCs) are large multi-protein complexes that control bidirectional trafficking of macromolecules between the nucleus and cytoplasm. This trafficking is highly regulated and participates in a considerably broader range of cellular activities, including defense responses against pathogens in plants. Recently, NPC is emerging as a platform to physically associate the underlying chromatin with the nuclear periphery, thus regulating chromatin structure and gene expression. For instance, NPC components have been shown to promote the formation of specific genomics loops, which is linked to transcriptional memory for rapid reactivation of genes. With newly developed techniques and tools, our insight in this area has been substantially advanced. This review summarizes recent works on the molecular function of NPC machinery as hubs for transcriptional regulation and compares systems between plant and non-plant organisms.

摘要

核孔复合体(NPC)是一种大型的多蛋白复合物,控制着核质与细胞质之间的大分子物质的双向运输。这种运输受到高度调控,参与了更广泛的细胞活动,包括植物对病原体的防御反应。最近,NPC 作为一个平台,将潜在的染色质与核周联系起来,从而调节染色质结构和基因表达。例如,已经表明 NPC 成分促进了特定基因组环的形成,这与基因的快速重新激活的转录记忆有关。随着新技术和工具的发展,我们在这一领域的认识有了实质性的进展。这篇综述总结了 NPC 机械作为转录调控枢纽的分子功能的最新研究进展,并比较了植物和非植物生物之间的系统。

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Spatial chromatin organization and gene regulation at the nuclear lamina.核纤层上的空间染色质组织和基因调控。
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2
Structure and Assembly of the Nuclear Pore Complex.核孔复合体的结构与装配。
Annu Rev Biophys. 2019 May 6;48:515-536. doi: 10.1146/annurev-biophys-052118-115308. Epub 2019 Apr 3.
3
Three-dimensional chromatin packing and positioning of plant genomes.植物基因组的三维染色质包装和定位。
Plant Cell. 2024 May 29;36(6):2065-2085. doi: 10.1093/plcell/koae084.
4
The nuclear pore Y-complex functions as a platform for transcriptional regulation of FLOWERING LOCUS C in Arabidopsis.核孔 Y 复合物作为拟南芥中开花时间基因 C 转录调控的平台。
Plant Cell. 2024 Jan 30;36(2):346-366. doi: 10.1093/plcell/koad271.
5
Evolutionarily conserved protein motifs drive interactions between the plant nucleoskeleton and nuclear pores.进化上保守的蛋白质基序驱动植物核骨架与核孔之间的相互作用。
Plant Cell. 2023 Nov 30;35(12):4284-4303. doi: 10.1093/plcell/koad236.
6
CPR5-mediated nucleo-cytoplasmic localization of IAA12 and IAA19 controls lateral root development during abiotic stress.CPR5 介导的 IAA12 和 IAA19 的核质定位控制非生物胁迫下侧根的发育。
Proc Natl Acad Sci U S A. 2023 Jan 17;120(3):e2209781120. doi: 10.1073/pnas.2209781120. Epub 2023 Jan 9.
7
GBPL3 localizes to the nuclear pore complex and functionally connects the nuclear basket with the nucleoskeleton in plants.GBPL3 定位于核孔复合体,并在植物中功能性地将核篮与核骨架连接起来。
PLoS Biol. 2022 Oct 21;20(10):e3001831. doi: 10.1371/journal.pbio.3001831. eCollection 2022 Oct.
8
Function of Nuclear Pore Complexes in Regulation of Plant Defense Signaling.核孔复合体在植物防御信号调控中的功能。
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