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通过DNA纳米结构的光激活自组装对DNA水凝胶进行光刻形状控制。

Photolithographic shape control of DNA hydrogels by photo-activated self-assembly of DNA nanostructures.

作者信息

Kasahara Yu, Sato Yusuke, Masukawa Marcos K, Okuda Yukiko, Takinoue Masahiro

机构信息

Department of Computer Science, Tokyo Institute of Technology, Yokohama, Kanagawa 226-8502, Japan.

出版信息

APL Bioeng. 2020 Mar 20;4(1):016109. doi: 10.1063/1.5132929. eCollection 2020 Mar.

Abstract

We report a photolithographic method for the shape control of DNA hydrogels based on photo-activated self-assembly of Y-shaped DNA nanostructures (Y-motifs). To date, various methods to control the shape of DNA hydrogels have been developed to enhance the functions of the DNA hydrogel system. However, photolithographic production of shape-controlled DNA hydrogels formed through the self-assembly of DNA nanostructures without the use of radical polymerizations has never been demonstrated, although such a method is expected to be applied for the shape-control of DNA hydrogels encapsulating sensitive biomolecules, such as proteins. In this study, we used a photo-activated linker to initiate the self-assembly of Y-motifs, where the cross-linker DNA was at first inactive but was activated after UV light irradiation, resulting in the formation of shape-controlled DNA hydrogels only at the UV-exposed area produced by photomasks. We believe that this method will be applied for the construction of biohybrid machines, such as molecular robots and artificial cells that contain intelligent biomolecular devices, such as molecular sensors and computers.

摘要

我们报道了一种基于Y形DNA纳米结构(Y基序)的光激活自组装来控制DNA水凝胶形状的光刻方法。迄今为止,已经开发出各种控制DNA水凝胶形状的方法,以增强DNA水凝胶系统的功能。然而,通过DNA纳米结构的自组装形成形状可控的DNA水凝胶而不使用自由基聚合的光刻生产方法从未得到证实,尽管这种方法有望应用于封装敏感生物分子(如蛋白质)的DNA水凝胶的形状控制。在本研究中,我们使用光激活连接子来启动Y基序的自组装,其中交联剂DNA最初是无活性的,但在紫外光照射后被激活,从而仅在由光掩模产生的紫外曝光区域形成形状可控的DNA水凝胶。我们相信这种方法将应用于生物杂交机器的构建,如分子机器人和包含智能生物分子装置(如分子传感器和计算机)的人工细胞。

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