Key Laboratory of Horticulture Science for Southern Mountainous Regions, Ministry of Education, Southwest University, No. 2 Tiansheng Road, Beibei, Chongqing 400715, China.
Academy of Agricultural Sciences, Southwest University, Chongqing 400715, China.
Int J Mol Sci. 2020 Mar 23;21(6):2209. doi: 10.3390/ijms21062209.
Phosphorus transporter () genes encode HPO/H co-transporters that absorb and transport inorganic nutrient elements required for plant development and growth and protect plants from heavy metal stress. However, little is known about the roles of in compared to . In this study, we identified and extensively analyzed 336 PHTs from three diploid ( and ) and two allotetraploid ( and ) species. We categorized the into five phylogenetic clusters (-), including 201 homologs, 15 homologs, 40 homologs, 54 homologs, and 26 homologs, which are unevenly distributed on the corresponding chromosomes of the five species. All family genes from are more closely related to Arabidopsis in the same vs. other clusters, suggesting they are highly conserved and have similar functions. Duplication and synteny analysis revealed that segmental and tandem duplications led to the expansion of the gene family during the process of polyploidization and that members of this family have undergone purifying selection during evolution based on Ka/Ks values. Finally, we explored the expression profiles of family genes in specific tissues, at various developmental stages, and under heavy metal stress via RNA-seq analysis and qRT-PCR. that were induced by heavy metal treatment might mediate the response of rapeseed to this important stress. This study represents the first genome-wide analysis of family genes in species. Our findings improve our understanding of family genes and provide a basis for further studies of in plant tolerance to heavy metal stress.
磷转运蛋白 () 基因编码 HPO/H 共转运蛋白,可吸收和转运植物发育和生长所需的无机营养元素,并保护植物免受重金属胁迫。然而,与 相比,人们对 在 中的作用知之甚少。在这项研究中,我们从三个二倍体( 和 )和两个异源四倍体( 和 ) 物种中鉴定并广泛分析了 336 个 PHTs。我们将 分为五个系统发育簇 (-),包括 201 个同源物、15 个同源物、40 个同源物、54 个同源物和 26 个同源物,它们在五个 物种的相应染色体上不均匀分布。来自 的所有 家族基因与拟南芥在同一聚类中与其他聚类的关系更为密切,这表明它们高度保守且具有相似的功能。复制和共线性分析表明,片段和串联复制导致在多倍化过程中 基因家族的扩张,并且该家族的成员在进化过程中经历了纯化选择,基于 Ka/Ks 值。最后,我们通过 RNA-seq 分析和 qRT-PCR 探索了 家族基因在特定组织、不同发育阶段和重金属胁迫下的表达谱。可能由重金属处理诱导的 可能介导油菜对这种重要胁迫的反应。本研究代表了 物种中 家族基因的首次全基因组分析。我们的研究结果提高了我们对 家族基因的理解,并为进一步研究植物对重金属胁迫的耐受性提供了基础。