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向日葵 P 型液泡膜 H+-ATP 酶亚家族基因的全基因组鉴定和分析及其在耐盐性发育中的作用。

Genome-Wide Identification and Analysis of P-Type Plasma Membrane H-ATPase Sub-Gene Family in Sunflower and the Role of and in the Development of Salt Stress Resistance.

机构信息

Marine Agriculture Research Center, Tobacco Research Institute of Chinese Academy of Agricultural Sciences, Qingdao 266101, China.

Crop Science Department, University of Zimbabwe, Harare 00263, Zimbabwe.

出版信息

Genes (Basel). 2020 Mar 27;11(4):361. doi: 10.3390/genes11040361.

Abstract

The P-type plasma membrane (PM) H-ATPase plays a major role during the growth and development of a plant. It is also involved in plant resistance to a variety of biotic and abiotic factors, including salt stress. The PM H-ATPase gene family has been well characterized in and other crop plants such as rice, cucumber, and potato; however, the same cannot be said in sunflower (). In this study, a total of thirteen PM H-ATPase genes were screened from the recently released sunflower genome database with a comprehensive genome-wide analysis. According to a systematic phylogenetic classification with a previously reported species, the sunflower PM H-ATPase genes () were divided into four sub-clusters (I, II, IV, and V). In addition, systematic bioinformatics analyses such as gene structure analysis, chromosome location analysis, subcellular localization predication, conserved motifs, and -acting elements of promoter identification were also done. Semi-quantitative PCR analysis data of in different sunflower tissues revealed the specificity of gene spatiotemporal expression and sub-cluster grouping. Those belonging to sub-cluster I and II exhibited wide expression in almost all of the tissues studied while sub-cluster IV and V seldom showed expression. In addition, the expression of , and was shown to be induced by salt stress. The transgenic plants overexpressing and showed higher salinity tolerance compared with wild-type plants. Further analysis showed that the Na content of transgenic plants decreased under salt stress, which indicates that PM H ATPase participates in the physiological process of Na efflux, resulting in salt resistance of the plants. This study is the first to identify and analyze the sunflower PM H ATPase gene family. It does not only lay foundation for future research but also demonstrates the role played by in salt stress tolerance.

摘要

质膜 P 型 H+-ATP 酶在植物生长发育过程中起着重要作用。它还参与植物对各种生物和非生物因素的抗性,包括盐胁迫。质膜 H+-ATP 酶基因家族在拟南芥和其他作物如水稻、黄瓜和土豆中得到了很好的描述;然而,在向日葵中却并非如此。在这项研究中,从最近发布的向日葵基因组数据库中筛选出了 13 个质膜 H+-ATP 酶基因,并进行了全面的全基因组分析。根据与先前报道的物种进行的系统系统发育分类,向日葵质膜 H+-ATP 酶基因()分为四个亚群(I、II、IV 和 V)。此外,还进行了系统的生物信息学分析,如基因结构分析、染色体定位分析、亚细胞定位预测、保守基序和启动子识别的顺式作用元件分析。在不同向日葵组织中进行的半定量 PCR 分析数据表明,基因时空表达的特异性和亚群分组。属于亚群 I 和 II 的基因在几乎所有研究的组织中都有广泛的表达,而亚群 IV 和 V 则很少表达。此外,盐胁迫诱导了 、 和 的表达。过表达 和 的转基因植物与野生型植物相比表现出更高的耐盐性。进一步的分析表明,在盐胁迫下,转基因 植物的 Na 含量降低,这表明质膜 H+-ATP 酶参与了 Na 外排的生理过程,从而提高了植物的耐盐性。这项研究首次鉴定和分析了向日葵质膜 H+-ATP 酶基因家族。它不仅为未来的研究奠定了基础,还证明了 在耐盐性中的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/37b3/7231311/70d9d3d34125/genes-11-00361-g001.jpg

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