Singapore Institute of Food and Biotechnology Innovation (SIFBI), Agency for Science, Technology and Research (A*STAR), Singapore, Republic of Singapore.
Institute of Food Chemistry and Food Biotechnology, Justus Liebig University Giessen, Giessen, Germany.
ACS Chem Biol. 2020 May 15;15(5):1268-1277. doi: 10.1021/acschembio.0c00155. Epub 2020 Apr 7.
Terpenoids constitute a structurally diverse group of natural products with wide applications in the pharmaceutical, nutritional, flavor and fragrance industries. Fungi are known to produce a large variety of terpenoids, yet fungal terpene synthases remain largely unexploited. Here, we report the sesquiterpene network and gene clusters of the black poplar mushroom Among 11 putative sesquiterpene synthases (STSs) identified in its genome, nine are functional, including two novel synthases producing viridiflorol and viridiflorene. On this basis, an additional 1133 STS homologues from higher fungi have been curated and used for a sequence similarity network to probe isofunctional STS groups. With the focus on two STS groups, one producing viridiflorene/viridiflorol and one Δ-protoilludene, the isofunctionality was probed and verified. Three new Δ-protoilludene synthases and two new viridflorene/viridiflorol synthases from five different fungi were correctly predicted. The study herein serves as a fundamental predictive framework for the discovery of fungal STSs and biosynthesis of novel terpenoids. Furthermore, it becomes clear that fungal STS function differs between the phyla Ascomycota and Basidiomycota with the latter phylum being more dominant in the overall number and variability. This study aims to encourage the scientific community to further work on fungal STS and the products, biological functions, and potential applications of this vast source of natural products.
萜类化合物是一类结构多样的天然产物,广泛应用于制药、营养、香料和香精等行业。真菌被认为能产生大量的萜类化合物,但真菌萜烯合酶在很大程度上尚未被开发利用。在这里,我们报告了黑杨菇的倍半萜类网络和基因簇。在其基因组中鉴定的 11 种假定的倍半萜合酶(STSs)中,有 9 种是功能性的,包括两种产生绿白醇和绿白烯的新型合酶。在此基础上,从高等真菌中精选了 1133 种 STS 同源物,并用于序列相似性网络,以探测同功能 STS 群。以产生绿白烯/绿白醇和 Δ-原莪术烯的两个 STS 群为重点,对同功能进行了探测和验证。从五个不同的真菌中正确预测了三个新的 Δ-原莪术烯合酶和两个新的绿白烯/绿白醇合酶。本研究为真菌 STS 的发现和新型萜类化合物的生物合成提供了一个基本的预测框架。此外,很明显,真菌 STS 的功能在子囊菌门和担子菌门之间存在差异,后者在总数和可变性方面更为占优势。这项研究旨在鼓励科学界进一步研究真菌 STS 及其产物、生物功能和这种天然产物巨大来源的潜在应用。