• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

八腕目物种多样化的生物地理框架:巴拿马地峡的作用。

A biogeographic framework of octopod species diversification: the role of the Isthmus of Panama.

作者信息

Lima Francoise D, Strugnell Jan M, Leite Tatiana S, Lima Sergio M Q

机构信息

Department of Botany and Zoology, Universidade Federal do Rio Grande do Norte, Natal, Rio Grande do Norte, Brazil.

Centre for Sustainable Tropical Fisheries and Aquaculture, James Cook University, Townsville, Queensland, Australia.

出版信息

PeerJ. 2020 Mar 27;8:e8691. doi: 10.7717/peerj.8691. eCollection 2020.

DOI:10.7717/peerj.8691
PMID:32257633
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7104719/
Abstract

The uplift of the Isthmus of Panama (IP) created a land bridge between Central and South America and caused the separation of the Western Atlantic and Eastern Pacific oceans, resulting in profound changes in the environmental and oceanographic conditions. To evaluate how these changes have influenced speciation processes in octopods, fragments of two mitochondrial (Cytochrome oxidase subunit I, COI and 16S rDNA) and two nuclear (Rhodopsin and Elongation Factor-1α, EF-1α) genes were amplified from samples from the Atlantic and Pacific oceans. One biogeographical and four fossil calibration priors were used within a relaxed Bayesian phylogenetic analysis framework to estimate divergence times among cladogenic events. Reconstruction of the ancestral states in phylogenies was used to infer historical biogeography of the lineages and species dispersal routes. The results revealed three well-supported clades of transisthmian octopus sister species pair/complex (TSSP/TSSC) and two additional clades showing a low probability of species diversification, having been influenced by the IP. Divergence times estimated in the present study revealed that octopod TSSP/TSSC from the Atlantic and Pacific diverged between the Middle Miocene and Early Pliocene (mean range = 5-18 Ma). Given that oceanographic changes caused by the uplift of the IP were so strong as to affect the global climate, we suggest that octopod TSSP/TSSC diverged because of these physical and environmental barriers, even before the complete uplift of the IP 3 Ma, proposed by the Late Pliocene model. The results obtained in this phylogenetic reconstruction also indicate that the octopus species pairs in each ocean share a recent common ancestor from the Pacific Ocean.

摘要

巴拿马地峡的隆起在中美洲和南美洲之间形成了一座陆桥,并导致了西大西洋和东太平洋的分离,从而引发了环境和海洋条件的深刻变化。为了评估这些变化如何影响八腕目动物的物种形成过程,从大西洋和太平洋的样本中扩增了两个线粒体基因片段(细胞色素氧化酶亚基I,COI和16S rDNA)和两个核基因片段(视紫红质和延伸因子-1α,EF-1α)。在宽松的贝叶斯系统发育分析框架内,使用了一种生物地理和四种化石校准先验来估计分支事件之间的分歧时间。通过系统发育树中祖先状态的重建来推断谱系的历史生物地理学和物种扩散路线。结果揭示了三个得到充分支持的跨地峡章鱼姐妹物种对/复合体(TSSP/TSSC)分支,以及另外两个显示物种多样化可能性较低的分支,它们受到了巴拿马地峡的影响。本研究估计的分歧时间表明,来自大西洋和太平洋的八腕目TSSP/TSSC在中新世中期和上新世早期之间发生了分歧(平均范围=5-18 Ma)。鉴于巴拿马地峡隆起引起的海洋学变化如此强烈,以至于影响了全球气候,我们认为八腕目TSSP/TSSC的分歧是由于这些物理和环境障碍,甚至早于上新世晚期模型提出的3 Ma巴拿马地峡完全隆起之前。在这个系统发育重建中获得的结果还表明,每个海洋中的章鱼物种对都有一个来自太平洋的最近共同祖先。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f51b/7104719/92b576eb32c5/peerj-08-8691-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f51b/7104719/b47d7e9fff56/peerj-08-8691-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f51b/7104719/92b576eb32c5/peerj-08-8691-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f51b/7104719/b47d7e9fff56/peerj-08-8691-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f51b/7104719/92b576eb32c5/peerj-08-8691-g002.jpg

相似文献

1
A biogeographic framework of octopod species diversification: the role of the Isthmus of Panama.八腕目物种多样化的生物地理框架:巴拿马地峡的作用。
PeerJ. 2020 Mar 27;8:e8691. doi: 10.7717/peerj.8691. eCollection 2020.
2
Speciation and diversity on tropical rocky shores: a global phylogeny of snails of the genus Echinolittorina.热带岩石海岸的物种形成与多样性:棘滨螺属蜗牛的全球系统发育研究
Evolution. 2004 Oct;58(10):2227-51. doi: 10.1111/j.0014-3820.2004.tb01600.x.
3
Patterns of divergence in fish species separated by the Isthmus of Panama.被巴拿马地峡分隔的鱼类物种的分化模式。
BMC Evol Biol. 2017 May 10;17(1):111. doi: 10.1186/s12862-017-0957-4.
4
PHYLOGEOGRAPHY OF THE PANTROPICAL SEA URCHIN EUCIDARIS IN RELATION TO LAND BARRIERS AND OCEAN CURRENTS.泛热带海胆Eucidaris的系统地理学与陆地屏障和洋流的关系
Evolution. 1999 Jun;53(3):806-817. doi: 10.1111/j.1558-5646.1999.tb05374.x.
5
Speciation in the dark: diversification and biogeography of the deep-sea gastropod genus in the Atlantic Ocean.黑暗中的物种形成:大西洋深海腹足纲属的多样化与生物地理学
J Biogeogr. 2015 May;42(5):843-855. doi: 10.1111/jbi.12471. Epub 2015 Jan 30.
6
Dispersal barriers in tropical oceans and speciation in Atlantic and eastern Pacific sea urchins of the genus Echinometra.热带海洋中的扩散障碍与艾氏海胆属在大西洋和东太平洋海胆中的物种形成
Mol Ecol. 2000 Sep;9(9):1391-400. doi: 10.1046/j.1365-294x.2000.01022.x.
7
Population structure and speciation in tropical seas: global phylogeography of the sea urchin Diadema.热带海洋中的种群结构与物种形成:海胆冠海胆的全球系统地理学
Evolution. 2001 May;55(5):955-75. doi: 10.1554/0014-3820(2001)055[0955:psasit]2.0.co;2.
8
Total evidence time-scaled phylogenetic and biogeographic models for the evolution of sea cows (Sirenia, Afrotheria).海牛(海牛目,非洲兽总目)进化的全证据时间溯祖系统发生和生物地理学模型。
PeerJ. 2022 Aug 25;10:e13886. doi: 10.7717/peerj.13886. eCollection 2022.
9
Molecular phylogeny and historical biogeography of Nacella (Patellogastropoda: Nacellidae) in the Southern Ocean.南大洋中 Nacella(腹足纲:Nacellidae)的分子系统发育和历史生物地理学。
Mol Phylogenet Evol. 2010 Jul;56(1):115-24. doi: 10.1016/j.ympev.2010.02.001. Epub 2010 Feb 6.
10
Tethyan changes shaped aquatic diversification.特提斯海演化影响水生生物多样性。
Biol Rev Camb Philos Soc. 2018 May;93(2):874-896. doi: 10.1111/brv.12376. Epub 2017 Oct 12.

引用本文的文献

1
Integrating hotspot dynamics and centers of diversity: a review of Indo-Australian Archipelago biogeographic evolution and conservation.整合热点动态与多样性中心:对印度-澳大利亚群岛生物地理演化与保护的综述
Mar Life Sci Technol. 2025 Jul 30;7(3):420-433. doi: 10.1007/s42995-025-00313-w. eCollection 2025 Aug.
2
Deep genetic divergences and few morphological changes support the cryptic speciation in Larimus breviceps (Sciaenidae, Acanthuriformes) from the western South Atlantic.深度遗传分化和极少的形态变化支持了来自南大西洋西部的短头拟牙䱛(拟牙䱛科,刺尾鱼目)的隐存物种形成。
Sci Rep. 2024 Dec 28;14(1):31541. doi: 10.1038/s41598-024-83196-8.
3

本文引用的文献

1
Divergence time estimates for major cephalopod groups: evidence from multiple genes.主要头足类动物类群的分化时间估计:来自多个基因的证据。
Cladistics. 2006 Feb;22(1):89-96. doi: 10.1111/j.1096-0031.2006.00086.x.
2
The thermohaline expressway: the Southern Ocean as a centre of origin for deep-sea octopuses.热比容输送高速公路:南大洋作为深海章鱼的起源中心。
Cladistics. 2008 Dec;24(6):853-860. doi: 10.1111/j.1096-0031.2008.00234.x. Epub 2008 Nov 11.
3
Genus-level phylogeny of cephalopods using molecular markers: current status and problematic areas.
Atlantic Oceanic Squids in the "Grey Speciation Zone".
大西洋性鱿鱼在“灰色物种形成区”。
Integr Comp Biol. 2023 Dec 29;63(6):1214-1225. doi: 10.1093/icb/icad116.
4
Genetic confirmation of (Leite and Haimovici, 2008) in South Florida, United States using physical features and genome assembly.在美国南佛罗里达州,利用物理特征和基因组组装对(莱特和海莫维奇,2008年)进行基因确认。
Front Physiol. 2023 Jun 20;14:1162807. doi: 10.3389/fphys.2023.1162807. eCollection 2023.
5
Morphological description and mitochondrial DNA-based phylogenetic placement of a new species of Taki, 1964 (Cephalopoda, Octopodidae) from the southeast waters of China.基于形态学描述及线粒体DNA的中国东南海域1964年塔氏蛸属一新物种(头足纲,蛸科)的系统发育定位
Zookeys. 2022 Sep 12;1121:1-15. doi: 10.3897/zookeys.1121.86264. eCollection 2022.
利用分子标记的头足类动物科级系统发育:现状与问题领域。
PeerJ. 2018 Feb 12;6:e4331. doi: 10.7717/peerj.4331. eCollection 2018.
4
GENETIC AND MORPHOLOGICAL DIVERGENCE AMONG MORPHOTYPES OF THE ISOPOD EXCIROLANA ON THE TWO SIDES OF THE ISTHMUS OF PANAMA.巴拿马地峡两侧等足类动物Excirolana不同形态类型之间的遗传和形态差异。
Evolution. 1994 Jun;48(3):530-548. doi: 10.1111/j.1558-5646.1994.tb01342.x.
5
DIVERGENCE IN ALLOPATRY: MOLECULAR AND MORPHOLOGICAL DIFFERENTIATION BETWEEN SEA URCHINS SEPARATED BY THE ISTHMUS OF PANAMA.异域分布中的趋异:被巴拿马地峡分隔的海胆之间的分子与形态分化
Evolution. 1981 Jul;35(4):618-634. doi: 10.1111/j.1558-5646.1981.tb04924.x.
6
Formation of the Isthmus of Panama.巴拿马地峡的形成。
Sci Adv. 2016 Aug 17;2(8):e1600883. doi: 10.1126/sciadv.1600883. eCollection 2016 Aug.
7
Molecular Phylogeny and Biogeography of the Amphidromous Fish Genus Dormitator Gill 1861 (Teleostei: Eleotridae).1861年吉尔所描述的洄游性鱼类多眠鱼属(硬骨鱼纲:塘鳢科)的分子系统发育与生物地理学
PLoS One. 2016 Apr 13;11(4):e0153538. doi: 10.1371/journal.pone.0153538. eCollection 2016.
8
Biological evidence supports an early and complex emergence of the Isthmus of Panama.生物学证据支持巴拿马地峡早期且复杂的形成过程。
Proc Natl Acad Sci U S A. 2015 May 12;112(19):6110-5. doi: 10.1073/pnas.1423853112. Epub 2015 Apr 27.
9
Middle Miocene closure of the Central American Seaway.中中新世中美地峡海道关闭。
Science. 2015 Apr 10;348(6231):226-9. doi: 10.1126/science.aaa2815.
10
Geology. An early start for the Panama land bridge.地质学。巴拿马陆桥的早期形成。
Science. 2015 Apr 10;348(6231):186-7. doi: 10.1126/science.aab0099.