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硫转移酶 TtuA 的 [4Fe-4S] 簇在嗜热栖热菌中 tRNA 修饰过程中使 TtuB 脱硫。

The [4Fe-4S] cluster of sulfurtransferase TtuA desulfurizes TtuB during tRNA modification in Thermus thermophilus.

机构信息

Faculty of Advanced Life Science, Hokkaido University, Kita 8, Nishi 5, Kita-ku, Sapporo, Hokkaido, 060-0810, Japan.

Graduate School of Life Science, Hokkaido University, Kita 8, Nishi 5, Kita-ku, Sapporo, Hokkaido, 060-0810, Japan.

出版信息

Commun Biol. 2020 Apr 7;3(1):168. doi: 10.1038/s42003-020-0895-3.

Abstract

TtuA and TtuB are the sulfurtransferase and sulfur donor proteins, respectively, for biosynthesis of 2-thioribothymidine (sT) at position 54 of transfer RNA (tRNA), which is responsible for adaptation to high temperature environments in Thermus thermophilus. The enzymatic activity of TtuA requires an iron-sulfur (Fe-S) cluster, by which a sulfur atom supplied by TtuB is transferred to the tRNA substrate. Here, we demonstrate that the Fe-S cluster directly receives sulfur from TtuB through its inherent coordination ability. TtuB forms a [4Fe-4S]-TtuB intermediate, but that sulfur is not immediately released from TtuB. Further desulfurization assays and mutation studies demonstrated that the release of sulfur from the thiocarboxylated C-terminus of TtuB is dependent on adenylation of the substrate tRNA, and the essential residue for TtuB desulfurization was identified. Based on these findings, the molecular mechanism of sulfur transfer from TtuB to Fe-S cluster is proposed.

摘要

TtuA 和 TtuB 分别是硫转移酶和硫供体蛋白,用于在 Thermus thermophilus 的转移 RNA(tRNA)的第 54 位合成 2-硫代胞嘧啶(sT),该反应负责适应高温环境。TtuA 的酶活性需要一个铁-硫(Fe-S)簇,TtuB 提供的一个硫原子通过该簇转移到 tRNA 底物上。在这里,我们证明 Fe-S 簇通过其内在的配位能力直接从 TtuB 接收硫。TtuB 形成 [4Fe-4S]-TtuB 中间体,但硫不会立即从 TtuB 中释放出来。进一步的脱硫测定和突变研究表明,TtuB 的硫代羧基化 C 末端的硫释放依赖于底物 tRNA 的腺苷酸化,并且确定了 TtuB 脱硫的必需残基。基于这些发现,提出了 TtuB 向 Fe-S 簇转移硫的分子机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3435/7138817/c2f600108149/42003_2020_895_Fig1_HTML.jpg

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