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通过景观和概率通量量化揭示癌症代谢的潜在机制。

Uncovering the Underlying Mechanisms of Cancer Metabolism through the Landscapes and Probability Flux Quantifications.

作者信息

Li Wenbo, Wang Jin

机构信息

State Key Laboratory of Electroanalytical Chemistry, Changchun Institute of Applied Chemistry, Chinese Academy of Sciences, Changchun, Jilin 130022, China.

Department of Chemistry and Physics, State University of New York at Stony Brook, Stony Brook, NY 11794-3400, USA.

出版信息

iScience. 2020 Apr 24;23(4):101002. doi: 10.1016/j.isci.2020.101002. Epub 2020 Mar 25.

Abstract

Cancer metabolism is critical for understanding the mechanism of tumorigenesis, yet the understanding is still challenging. We studied gene-metabolism regulatory interactions and quantified the global driving forces for cancer-metabolism dynamics as the underlying landscape and probability flux. We uncovered four steady-state attractors: a normal state attractor, a cancer OXPHOS state attractor, a cancer glycolysis state attractor, and an intermediate cancer state attractor. We identified the key regulatory interactions through global sensitivity analysis based on the landscape topography. Different landscape topographies of glycolysis switch between normal cells and cancer cells were identified. We uncovered that the normal state to cancer state transformation is associated with the peaks of the probability flux and the thermodynamic dissipation, giving dynamical and thermodynamic origin of cancer formation. We found that cancer metabolism oscillations consume more energy to support cancer malignancy. This study provides a quantitative understanding of cancer metabolism and suggests a metabolic therapeutic strategy.

摘要

癌症代谢对于理解肿瘤发生机制至关重要,然而目前对此的理解仍具有挑战性。我们研究了基因-代谢调控相互作用,并将癌症代谢动力学的全局驱动力量化为潜在景观和概率通量。我们发现了四个稳态吸引子:一个正常状态吸引子、一个癌症氧化磷酸化状态吸引子、一个癌症糖酵解状态吸引子和一个中间癌症状态吸引子。我们通过基于景观地形的全局敏感性分析确定了关键调控相互作用。我们识别出了正常细胞与癌细胞之间糖酵解的不同景观地形。我们发现从正常状态到癌症状态的转变与概率通量和热力学耗散的峰值相关,揭示了癌症形成的动力学和热力学起源。我们发现癌症代谢振荡消耗更多能量以支持癌症的恶性发展。本研究提供了对癌症代谢的定量理解,并提出了一种代谢治疗策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cde7/7150521/95cfce320207/fx1.jpg

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