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是肺腺癌的预后标志物和潜在致癌基因。

Is a Prognosis Signature and Potential Oncogene of Lung Adenocarcinoma.

机构信息

Clinical Laboratory of Tianjin Chest Hospital, Tianjin, China.

Clinical and Pathology Center, Tianjin Institute of Pharmaceutical Research New Drug Evaluation Co., Ltd., Tianjin, China.

出版信息

DNA Cell Biol. 2020 May;39(5):890-899. doi: 10.1089/dna.2019.4970. Epub 2020 Apr 13.

Abstract

Lung adenocarcinoma (LUAD) is the most common subtype of nonsmall cell lung cancer, and 5-year survival rate is only 15% in recent years. This study aimed to explore the expression and its potential functions in LUAD. Data of LUAD were downloaded from The Cancer Genome Atlas database. Expression level of was compared between LUAD samples and adjacent normal samples. The association between expression and clinic-pathological parameters was analyzed, as well as copy number variation and methylation status. Kaplan-Meier curve was used to visualize the relationship of expression with survival outcomes. Finally, gene set enrichment analysis was used to identify potential signaling pathways in LUAD specimens. expression was significantly correlated with four clinical factors in LUAD specimens, age, gender, smoking, and overall survival status (all  < 0.05). High expression level of was negatively correlated with methylation level. Moreover, patients in low expression groups exhibited a better prognosis than those in high expressed groups, which was independent of gender ( < 0.001). Histidine metabolism pathway was significantly upregulated in -high expressed samples than -low expressed samples according to functional enrichment analysis. High expression of predicted a poor prognosis in LUAD patients. Our study demonstrated that might be a potential biomarker and meaningful therapeutic target in LUAD.

摘要

肺腺癌 (LUAD) 是最常见的非小细胞肺癌亚型,近年来 5 年生存率仅为 15%。本研究旨在探讨其在 LUAD 中的表达及其潜在功能。从癌症基因组图谱数据库下载 LUAD 数据。比较 LUAD 样本和相邻正常样本中 的表达水平。分析 表达与临床病理参数的关系,以及拷贝数变异和甲基化状态。Kaplan-Meier 曲线用于直观显示 表达与生存结局的关系。最后,基因集富集分析用于鉴定 LUAD 标本中的潜在信号通路。 在 LUAD 标本中, 的表达与四个临床因素(年龄、性别、吸烟和总生存状态)显著相关(均<0.05)。 高表达与甲基化水平呈负相关。此外,低表达组患者的预后优于高表达组,且与性别无关(<0.001)。根据功能富集分析,组氨酸代谢途径在高表达样本中明显上调。 在 LUAD 患者中,高表达预示着预后不良。我们的研究表明, 可能是 LUAD 潜在的生物标志物和有意义的治疗靶点。

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