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聚(4-硫代尿苷酸)作为信使核糖核酸及其在核糖体信使核糖核酸结合位点光亲和标记中的应用。

Poly(4-thiouridylic acid) as messenger RNA and its application for photoaffinity labelling of the ribosomal mRNA binding site.

作者信息

Fiser I, Scheit K H, Kuechler E

出版信息

Eur J Biochem. 1977 Apr 15;74(3):447-56. doi: 10.1111/j.1432-1033.1977.tb11411.x.

DOI:10.1111/j.1432-1033.1977.tb11411.x
PMID:323011
Abstract

Poly(4-thiouridylic acid) [poly(s4U)] synthesized by polymerization of 4-thiouridine 5'-diphosphate with Escherichia coli polynucleotide phosphorylase (EC 2.7.7.8) acts as messenger RNA in vitro in a protein-synthesizing system from E. coli. It stimulates binding of Phe-tRNA to ribosomes both in the presence of EF-Tu-Ts at 5 mM Mg2+ concentration and nonenzymatically at 20 mM Mg2+ concentration. It codes for the synthesis of polyphenylalanine. Poly(s4U) competes with poly(U) for binding to E. coli ribosomes. Light of 330 nm photoactivates poly(s4U) thus making it a useful photoaffinity label for the ribosomal mRNA binding site. Upon irradiation of 70-S ribosomal complexes, photoreaction occurs with ribosomal proteins as well as 16-S RNA. Ribosomes pre-incubated with R17 RNA are protected against the photoaffinity reaction. The labelling of 16-S RNA can be reduced by treatment of ribosomes with colicin E3.

摘要

由4-硫代尿苷5'-二磷酸与大肠杆菌多核苷酸磷酸化酶(EC 2.7.7.8)聚合合成的聚(4-硫代尿苷酸)[聚(s4U)]在大肠杆菌的体外蛋白质合成系统中充当信使RNA。在5 mM Mg2+浓度下存在EF-Tu-Ts时以及在20 mM Mg2+浓度下非酶促条件下,它都能刺激苯丙氨酰-tRNA与核糖体的结合。它编码多聚苯丙氨酸的合成。聚(s4U)与聚(U)竞争结合大肠杆菌核糖体。330 nm的光可使聚(s4U)光活化,因此使其成为核糖体mRNA结合位点的有用光亲和标记。照射70-S核糖体复合物时,核糖体蛋白以及16-S RNA都会发生光反应。预先与R17 RNA孵育的核糖体可免受光亲和反应的影响。用大肠菌素E3处理核糖体可减少16-S RNA的标记。

相似文献

1
Poly(4-thiouridylic acid) as messenger RNA and its application for photoaffinity labelling of the ribosomal mRNA binding site.聚(4-硫代尿苷酸)作为信使核糖核酸及其在核糖体信使核糖核酸结合位点光亲和标记中的应用。
Eur J Biochem. 1977 Apr 15;74(3):447-56. doi: 10.1111/j.1432-1033.1977.tb11411.x.
2
The effect of tRNA derivatives bound with natural or synthetic mRNA on the interaction of Escherichia coli ribosomes with colicin E3.与天然或合成mRNA结合的tRNA衍生物对大肠杆菌核糖体与大肠菌素E3相互作用的影响。
Eur J Biochem. 1975 May 6;53(2):599-603. doi: 10.1111/j.1432-1033.1975.tb04103.x.
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Photoaffinity labeling of the ribosomal A site with S-(p-azidophenacyl)valyl-tRNA.用S-(对叠氮苯甲酰)缬氨酰-tRNA对核糖体A位点进行光亲和标记。
Biochemistry. 1975 Jul;14(13):2907-14. doi: 10.1021/bi00684a018.
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Ribonuclease sensitivity of aminoacyl-tRNA: an assay for codon recognition and interaction of aminoacryl-tRNA with 50 S subunits.氨酰-tRNA的核糖核酸酶敏感性:一种用于密码子识别以及氨酰-tRNA与50 S亚基相互作用的测定方法。
Methods Enzymol. 1974;30:439-52. doi: 10.1016/0076-6879(74)30044-4.
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Interactions of adenosine diphosphate-ribosylated elongation factor 2 with ribosomes.二磷酸腺苷核糖基化延伸因子2与核糖体的相互作用。
J Biol Chem. 1976 Nov 10;251(21):6544-9.
6
Affinity-labelling of Escherichia coli ribosomes by a derivative of phenylalanyl-tRNA. A critical test for the specificity.
Biochim Biophys Acta. 1975 Jun 16;395(2):146-51. doi: 10.1016/0005-2787(75)90153-7.
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The effect of aminoacyl- or peptidyl-tRNA at the A-site on the arrangement of deacylated tRNA at the ribosomal P-site.A位点上氨酰基或肽基tRNA对核糖体P位点上脱酰基tRNA排列的影响。
FEBS Lett. 1984 May 21;170(2):290-4. doi: 10.1016/0014-5793(84)81330-7.
8
Involvement of 30S ribosomal protein S1 in poly(U)-directed polyphenylalanine synthesis.30S核糖体蛋白S1参与聚(U)指导的聚苯丙氨酸合成。
J Biochem. 1977 Nov;82(5):1485-9. doi: 10.1093/oxfordjournals.jbchem.a131838.
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Mechanism of action of colicin E3. Effect on ribosomal elongation-factor-dependent reactions.大肠杆菌素E3的作用机制。对核糖体延伸因子依赖性反应的影响。
Eur J Biochem. 1977 May 16;75(2):523-31. doi: 10.1111/j.1432-1033.1977.tb11553.x.
10
Modification of E. coli ribosomes and coliphage MS2 RNA by bisulfite: effects on ribosomal binding and protein synthesis.亚硫酸氢盐对大肠杆菌核糖体和噬菌体MS2 RNA的修饰:对核糖体结合和蛋白质合成的影响。
Nucleic Acids Res. 1975 Apr;2(4):501-7. doi: 10.1093/nar/2.4.501.

引用本文的文献

1
The effect of nucleotide analogs on cell-free gene expression.核苷酸类似物对无细胞基因表达的影响。
Nucleic Acids Res. 1984 Mar 12;12(5):2243-58. doi: 10.1093/nar/12.5.2243.
2
Localization of the decoding region on the 30S Escherichia coli ribosomal subunit by affinity immunoelectron microscopy.通过亲和免疫电子显微镜对大肠杆菌30S核糖体亚基上解码区域的定位
Proc Natl Acad Sci U S A. 1979 Mar;76(3):1054-8. doi: 10.1073/pnas.76.3.1054.
3
A photoaffinity labelling study of the messenger RNA-binding region of Escherichia coli ribosomes.
大肠杆菌核糖体信使核糖核酸结合区域的光亲和标记研究。
Nucleic Acids Res. 1978 Sep;5(9):3389-407. doi: 10.1093/nar/5.9.3389.