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本文引用的文献

1
SAFB2 Enables the Processing of Suboptimal Stem-Loop Structures in Clustered Primary miRNA Transcripts.SAFB2 使簇状初级 microRNA 转录本中次优茎环结构的加工成为可能。
Mol Cell. 2020 Jun 4;78(5):876-889.e6. doi: 10.1016/j.molcel.2020.05.011.
2
MirGeneDB 2.0: the metazoan microRNA complement.MirGeneDB 2.0:后生动物的微小RNA全集
Nucleic Acids Res. 2020 Jan 8;48(D1):D1172. doi: 10.1093/nar/gkz1016.
3
Global analyses of the dynamics of mammalian microRNA metabolism.哺乳动物 microRNA 代谢动力学的全局分析。
Genome Res. 2019 Nov;29(11):1777-1790. doi: 10.1101/gr.251421.119. Epub 2019 Sep 13.
4
Molecular Basis for the Single-Nucleotide Precision of Primary microRNA Processing.微小 RNA 加工的单核苷酸精度的分子基础。
Mol Cell. 2019 Feb 7;73(3):505-518.e5. doi: 10.1016/j.molcel.2018.11.005. Epub 2018 Dec 13.
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Metazoan MicroRNAs.后生动物 MicroRNAs。
Cell. 2018 Mar 22;173(1):20-51. doi: 10.1016/j.cell.2018.03.006.
6
Microprocessor Recruitment to Elongating RNA Polymerase II Is Required for Differential Expression of MicroRNAs.微处理器招募到延伸的 RNA 聚合酶 II 是差异表达 microRNAs 所必需的。
Cell Rep. 2017 Sep 26;20(13):3123-3134. doi: 10.1016/j.celrep.2017.09.010.
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A comprehensive, cell specific microRNA catalogue of human peripheral blood.人类外周血的全面、细胞特异性微小RNA目录。
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8
CRISPR/Cas9 editing reveals novel mechanisms of clustered microRNA regulation and function.CRISPR/Cas9 编辑揭示了簇状 microRNA 调控和功能的新机制。
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9
Enhancer of rudimentary homologue interacts with scaffold attachment factor B at the nuclear matrix to regulate SR protein phosphorylation.增强子 rudimentary 同源物与核基质中的支架附着因子 B 相互作用,以调节 SR 蛋白磷酸化。
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10
Cytoplasmic Drosha activity generated by alternative splicing.由可变剪接产生的细胞质Drosha活性。
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MicroRNA 聚类通过 ERH 蛋白的作用协助处理非最优 microRNA 发夹。

MicroRNA Clustering Assists Processing of Suboptimal MicroRNA Hairpins through the Action of the ERH Protein.

机构信息

Howard Hughes Medical Institute, Cambridge, MA 02142, USA; Whitehead Institute of Biomedical Research, Cambridge, MA 02142, USA; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

Howard Hughes Medical Institute, Cambridge, MA 02142, USA; Whitehead Institute of Biomedical Research, Cambridge, MA 02142, USA; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

出版信息

Mol Cell. 2020 Apr 16;78(2):289-302.e6. doi: 10.1016/j.molcel.2020.01.026.

DOI:10.1016/j.molcel.2020.01.026
PMID:32302541
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7243034/
Abstract

Microprocessor initiates the processing of microRNAs (miRNAs) from the hairpin regions of primary transcripts (pri-miRNAs). Pri-miRNAs often contain multiple miRNA hairpins, and this clustered arrangement can assist in the processing of otherwise defective hairpins. We find that miR-451, which derives from a hairpin with a suboptimal terminal loop and a suboptimal stem length, accumulates to 40-fold higher levels when clustered with a helper hairpin. This phenomenon tolerates changes in hairpin order, linker lengths, and the identities of the helper hairpin, the recipient hairpin, the linker-sequence, and the RNA polymerase that transcribes the hairpins. It can act reciprocally and need not occur co-transcriptionally. It requires Microprocessor recognition of the helper hairpin and linkage of the two hairpins, yet predominantly manifests after helper-hairpin processing. It also requires enhancer of rudimentary homolog (ERH), which copurifies with Microprocessor and can dimerize and interact with other proteins that can dimerize, suggesting a model in which one Microprocessor recruits another Microprocessor.

摘要

微处理器启动从小核糖核酸(miRNAs)前体转录物(pri-miRNAs)的发夹区域加工 microRNAs(miRNAs)。pri-miRNAs 通常包含多个 miRNA 发夹,这种簇状排列有助于加工 otherwise defective hairpins。我们发现,miR-451 来源于具有次优末端环和次优茎长的发夹,当与辅助发夹簇集时,积累到 40 倍的更高水平。这种现象容忍发夹顺序、连接长度以及辅助发夹、受体发夹、连接序列和转录发夹的 RNA 聚合酶的变化。它可以相互作用,并且不必发生共转录。它需要 Microprocessor 识别辅助发夹并连接两个发夹,但主要发生在辅助发夹加工之后。它还需要基本同源物增强子(ERH),它与 Microprocessor 共纯化,并可以二聚化并与其他可以二聚化的蛋白质相互作用,表明一个 Microprocessor 招募另一个 Microprocessor 的模型。