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通过模拟用户交互来测量半自动脑肿瘤分割的效率

Measuring Efficiency of Semi-automated Brain Tumor Segmentation by Simulating User Interaction.

作者信息

Gering David, Kotrotsou Aikaterini, Young-Moxon Brett, Miller Neal, Avery Aaron, Kohli Lisa, Knapp Haley, Hoffman Jeffrey, Chylla Roger, Peitzman Linda, Mackie Thomas R

机构信息

HealthMyne Inc., Madison, WI, United States.

出版信息

Front Comput Neurosci. 2020 Apr 16;14:32. doi: 10.3389/fncom.2020.00032. eCollection 2020.

DOI:10.3389/fncom.2020.00032
PMID:32372938
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7177174/
Abstract

Traditionally, radiologists have crudely quantified tumor extent by measuring the longest and shortest dimension by dragging a cursor between opposite boundary points across a single image rather than full segmentation of the volumetric extent. For algorithmic-based volumetric segmentation, the degree of radiologist experiential involvement varies from confirming a fully automated segmentation, to making a single drag on an image to initiate semi-automated segmentation, to making multiple drags and clicks on multiple images during interactive segmentation. An experiment was designed to test an algorithm that allows various levels of interaction. Given the ground-truth of the BraTS training data, which delimits the brain tumors of 285 patients on multi-spectral MR, a computer simulation mimicked the process that a radiologist would follow to perform segmentation with real-time interaction. Clicks and drags were placed only where needed in response to the deviation between real-time segmentation results and assumed radiologist's goal, as provided by the ground-truth. Results of accuracy for various levels of interaction are presented along with estimated elapsed time, in order to measure efficiency. Average total elapsed time, including loading the study through confirming 3D contours, was 46 s.

摘要

传统上,放射科医生通过在单个图像上相对边界点之间拖动光标来测量最长和最短尺寸,以此粗略地量化肿瘤范围,而不是对体积范围进行全部分割。对于基于算法的体积分割,放射科医生的经验参与程度各不相同,从确认全自动分割,到在图像上单次拖动以启动半自动分割,再到在交互式分割过程中在多个图像上进行多次拖动和点击。设计了一项实验来测试一种允许不同交互级别的算法。鉴于BraTS训练数据的真实情况(其在多光谱磁共振成像上界定了285名患者的脑肿瘤),计算机模拟模仿了放射科医生在实时交互下进行分割的过程。根据真实情况提供的实时分割结果与假定的放射科医生目标之间的偏差,仅在需要的地方进行点击和拖动。给出了不同交互级别的准确性结果以及估计的耗时,以衡量效率。包括通过确认3D轮廓加载研究在内的平均总耗时为46秒。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/aec4bc6f335b/fncom-14-00032-g0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/5415161bc731/fncom-14-00032-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/e54792459303/fncom-14-00032-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/a403276fcc18/fncom-14-00032-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/0ac5293b9bb9/fncom-14-00032-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/5f25b6b7dfa0/fncom-14-00032-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/9420cdbd9dfc/fncom-14-00032-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/71f0638fdc55/fncom-14-00032-g0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/aec4bc6f335b/fncom-14-00032-g0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/5415161bc731/fncom-14-00032-g0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/e54792459303/fncom-14-00032-g0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/a403276fcc18/fncom-14-00032-g0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/0ac5293b9bb9/fncom-14-00032-g0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/5f25b6b7dfa0/fncom-14-00032-g0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/9420cdbd9dfc/fncom-14-00032-g0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/71f0638fdc55/fncom-14-00032-g0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f133/7177174/aec4bc6f335b/fncom-14-00032-g0008.jpg

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本文引用的文献

1
A Roadmap for Foundational Research on Artificial Intelligence in Medical Imaging: From the 2018 NIH/RSNA/ACR/The Academy Workshop.人工智能在医学影像领域基础研究路线图:来自 2018 年 NIH/RSNA/ACR/美国学院联合研讨会
Radiology. 2019 Jun;291(3):781-791. doi: 10.1148/radiol.2019190613. Epub 2019 Apr 16.
2
DeepIGeoS: A Deep Interactive Geodesic Framework for Medical Image Segmentation.DeepIGeoS:用于医学图像分割的深度交互式测地线框架。
IEEE Trans Pattern Anal Mach Intell. 2019 Jul;41(7):1559-1572. doi: 10.1109/TPAMI.2018.2840695. Epub 2018 Jun 1.
3
Advancing The Cancer Genome Atlas glioma MRI collections with expert segmentation labels and radiomic features.
计算机断层扫描影像组学特征作为肺腺癌患者免疫治疗选择生物标志物的初步报告
Cancers (Basel). 2021 Aug 7;13(16):3992. doi: 10.3390/cancers13163992.
4
Quantitative imaging decision support (QIDS) tool consistency evaluation and radiomic analysis by means of 594 metrics in lung carcinoma on chest CT scan.基于 594 项指标的肺癌 CT 扫描定量成像决策支持(QIDS)工具一致性评估和放射组学分析。
Cancer Control. 2021 Jan-Dec;28:1073274820985786. doi: 10.1177/1073274820985786.
利用专家分割标签和放射组学特征推进癌症基因组图谱胶质细胞瘤 MRI 数据集。
Sci Data. 2017 Sep 5;4:170117. doi: 10.1038/sdata.2017.117.
4
The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).多模态脑肿瘤图像分割基准(BRATS)。
IEEE Trans Med Imaging. 2015 Oct;34(10):1993-2024. doi: 10.1109/TMI.2014.2377694. Epub 2014 Dec 4.
5
Volumetric CT-based segmentation of NSCLC using 3D-Slicer.基于容积 CT 的 NSCLC 三维分割(使用 3D-Slicer)。
Sci Rep. 2013 Dec 18;3:3529. doi: 10.1038/srep03529.
6
Glioblastoma and other malignant gliomas: a clinical review.胶质母细胞瘤和其他恶性胶质瘤:临床综述。
JAMA. 2013 Nov 6;310(17):1842-50. doi: 10.1001/jama.2013.280319.
7
Tools for consensus analysis of experts' contours for radiotherapy structure definitions.用于放射治疗结构定义专家轮廓共识分析的工具。
Radiother Oncol. 2010 Dec;97(3):572-8. doi: 10.1016/j.radonc.2010.06.009. Epub 2010 Aug 11.
8
Updated response assessment criteria for high-grade gliomas: response assessment in neuro-oncology working group.高级别胶质瘤更新后的反应评估标准:神经肿瘤学工作组的反应评估。
J Clin Oncol. 2010 Apr 10;28(11):1963-72. doi: 10.1200/JCO.2009.26.3541. Epub 2010 Mar 15.
9
Guidelines for the evaluation of immune therapy activity in solid tumors: immune-related response criteria.实体瘤免疫治疗疗效评价指南:免疫相关反应标准。
Clin Cancer Res. 2009 Dec 1;15(23):7412-20. doi: 10.1158/1078-0432.CCR-09-1624. Epub 2009 Nov 24.
10
New response evaluation criteria in solid tumours: revised RECIST guideline (version 1.1).实体瘤新的疗效评价标准:修订的RECIST指南(第1.1版)
Eur J Cancer. 2009 Jan;45(2):228-47. doi: 10.1016/j.ejca.2008.10.026.