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如何使工业细菌培养物保持长时间的稳定。

How industrial bacterial cultures can be kept stable over time.

机构信息

Molecular Microbiology and Genomics Consultants, Zotzenheim, Germany.

Symbiopharm GmbH, Herborn, Germany.

出版信息

Lett Appl Microbiol. 2020 Sep;71(3):220-228. doi: 10.1111/lam.13309. Epub 2020 Jun 21.

Abstract

The tremendous variation that exists between bacterial species illustrates the power of evolution, which is the continuous process of mutation and selection over time. Even within a bacterial species, individual members can harbour an impressive degree of genetic variation, depending on the species. The question then arises how similar the offspring of a given bacterial cell over time is, and how long it takes before differences are noticeable? Here we show that on the one hand one can expect random mutations to arise, as a result of various mechanisms. On the other hand, there are forces at play that keep the offspring of a cell genetically relatively constant, unless there is selection for a particular characteristic. The most common mechanisms behind mutations that can appear in a bacterial population are briefly introduced. Next, it is explained why nevertheless such mutations are rarely observed, as long as single colonies are randomly selected, unless selective pressures apply. Since quality control of industrial bacterial cultures is likely to depend heavily on genome sequencing in the near future, the accuracy of whole-genomic sequencing technologies is also discussed. It can be concluded that the bacteriologists who started picking single colonies from agar plates more than hundred years ago were unknowingly ingeneous, as their practice maintains a bacterial culture stable over time. SIGNIFICANCE AND IMPACT OF STUDY: The questions addressed here are relevant for industries that depend on live bacteria for (manufacturing of) their products, as they have to guard their bacterial cultures that remain unchanged over time. The explanation why randomly selection of single colonies keeps a population stable can be of use in bacteriology courses. The limitations of whole-genome sequencing are relevant to legislators to avoid overinterpretation of those data.

摘要

细菌物种之间存在着巨大的差异,这说明了进化的力量,进化是一个随着时间的推移不断发生突变和选择的过程。即使在一个细菌物种内,个体成员也可能拥有令人印象深刻的遗传变异程度,这取决于物种。那么问题就来了,给定的细菌细胞的后代在时间上有多相似,以及需要多长时间才能看出差异?在这里,我们表明一方面可以预期会出现随机突变,这是各种机制的结果。另一方面,也有一些力量在起作用,使细胞的后代在遗传上保持相对稳定,除非有选择特定特征的压力。简要介绍了在细菌种群中可能出现的常见突变机制。接下来,解释了为什么只要随机选择单个菌落,就很少观察到这种突变,除非存在选择压力。由于工业细菌培养物的质量控制在不久的将来可能严重依赖于基因组测序,因此还讨论了全基因组测序技术的准确性。可以得出结论,一百多年前开始从琼脂平板上挑取单个菌落的细菌学家们无意识地很有创造力,因为他们的实践使细菌培养物保持稳定。研究的意义和影响:这里讨论的问题与依赖活细菌(用于制造)其产品的行业相关,因为它们必须保护随着时间的推移保持不变的细菌培养物。随机选择单个菌落使种群稳定的解释可以在细菌学课程中使用。全基因组测序的局限性与立法者有关,以避免对这些数据的过度解释。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f8dc/7496531/2b40939dd240/LAM-71-220-g001.jpg

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