Di Gilio Alessia, Catino Annamaria, Lombardi Angela, Palmisani Jolanda, Facchini Laura, Mongelli Teresa, Varesano Niccolò, Bellotti Roberto, Galetta Domenico, de Gennaro Gianluigi, Tangaro Sabina
Department of Biology, University of Bari Aldo Moro, 70126 Bari, Italy.
Apulian Breath Analysis Center (CeRBA), IRCCS Giovanni Paolo II, 70124 Bari, Italy.
Cancers (Basel). 2020 May 16;12(5):1262. doi: 10.3390/cancers12051262.
Malignant pleural mesothelioma (MPM) is a rare neoplasm, mainly caused by asbestos exposure, with a high mortality rate. The management of patients with MPM is controversial due to a long latency period between exposure and diagnosis and because of non-specific symptoms generally appearing at advanced stage of the disease. Breath analysis, aimed at the identification of diagnostic Volatile Organic Compounds (VOCs) pattern in exhaled breath, is believed to improve early detection of MPM. Therefore, in this study, breath samples from 14 MPM patients and 20 healthy controls (HC) were collected and analyzed by Thermal Desorption-Gas Chromatography-Mass Spectrometry (TD-GC/MS). Nonparametric test allowed to identify the most weighting variables to discriminate between MPM and HC breath samples and multivariate statistics were applied. Considering that MPM is an aggressive neoplasm leading to a late diagnosis and thus the recruitment of patients is very difficult, a promising data mining approach was developed and validated in order to discriminate between MPM patients and healthy controls, even if no large population data are available. Three different machine learning algorithms were applied to perform the classification task with a leave-one-out cross-validation approach, leading to remarkable results (Area Under Curve AUC = 93%). Ten VOCs, such as ketones, alkanes and methylate derivates, as well as hydrocarbons, were able to discriminate between MPM patients and healthy controls and for each compound which resulted diagnostic for MPM, the metabolic pathway was studied in order to identify the link between VOC and the neoplasm. Moreover, five breath samples from asymptomatic asbestos-exposed persons (AEx) were exploratively analyzed, processed and tested by the validated statistical method as blinded samples in order to evaluate the performance for the early recognition of patients affected by MPM among asbestos-exposed persons. Good agreement was found between the information obtained by gold-standard diagnostic methods such as computed tomography CT and model output.
恶性胸膜间皮瘤(MPM)是一种罕见的肿瘤,主要由接触石棉引起,死亡率很高。由于接触与诊断之间的潜伏期长,且疾病晚期通常出现非特异性症状,MPM患者的治疗存在争议。呼气分析旨在识别呼出气体中的诊断性挥发性有机化合物(VOC)模式,被认为可改善MPM的早期检测。因此,在本研究中,收集了14例MPM患者和20例健康对照(HC)的呼气样本,并通过热解吸-气相色谱-质谱联用仪(TD-GC/MS)进行分析。非参数检验可识别区分MPM和HC呼气样本的最重要变量,并应用多变量统计方法。考虑到MPM是一种侵袭性肿瘤,导致诊断较晚,因此招募患者非常困难,开发并验证了一种有前景的数据挖掘方法,以区分MPM患者和健康对照,即使没有大量人群数据可用。应用三种不同的机器学习算法,采用留一法交叉验证方法执行分类任务,取得了显著结果(曲线下面积AUC = 93%)。十种VOCs,如酮类、烷烃和甲基化衍生物以及碳氢化合物,能够区分MPM患者和健康对照,对于每种被诊断为MPM的化合物,研究其代谢途径以确定VOC与肿瘤之间的联系。此外,对五例无症状石棉接触者(AEx)的呼气样本进行了探索性分析、处理,并通过经过验证的统计方法作为盲样本进行测试,以评估在石棉接触者中早期识别MPM患者的性能。在通过计算机断层扫描(CT)等金标准诊断方法获得的信息与模型输出之间发现了良好的一致性。