Løken S B, Skrede I, Schumacher T
Department of Biosciences, University of Oslo, P.O. Box 1066, 0316 Oslo, Norway.
Fungal Syst Evol. 2020 Jun;5:169-186. doi: 10.3114/fuse.2020.05.11. Epub 2019 Dec 4.
Mycologists have always been curious about the elaborate morphotypes and shapes of species of the genus . The small, black, cupulate specimens have mostly been assigned to a broadly defined morpho-species. Recent phylogenetic analyses, however, have revealed an aggregate of species hidden under this name. We performed a multispecies coalescent analysis to re-assess species limits and evolutionary relationships of the species aggregate in the Nordic countries. To achieve this, we used morphology and phylogenetic evidence from five loci - heat shock protein 90 (), translation elongation factor 1-alpha (), RNA polymerase II (), and the 5.8S and large subunit (LSU) of the nuclear ribosomal DNA. All specimens under the name in the larger university fungaria of Norway, Sweden and Denmark were examined and barcoded, using partial and/or as the preferential secondary barcodes in . Additional fresh specimens were collected in three years (2015-2018) to obtain morphological data to aid in species discrimination. The species aggregate consists of seven phylogenetically distinct species, nested in three divergent lineages, and in the /alpina-corium lineage, and in the /alpestris-nannfeldtii lineage, and as a weakly supported sister to the /alpestris-nannfeldtii lineage. Among the seven species, the ribosomal loci expressed substantial variation in evolutionary rates, suggesting care in the use of these regions alone in delimitation of species. Altogether, 469 out of 496 available fungarium specimens were successfully barcoded.
真菌学家一直对该属物种复杂的形态类型和形状感到好奇。那些小的、黑色的、杯状的标本大多被归入一个宽泛定义的形态物种。然而,最近的系统发育分析揭示了这个名称下隐藏的一群物种。我们进行了多物种溯祖分析,以重新评估北欧国家该物种集合的物种界限和进化关系。为了实现这一目标,我们使用了来自五个基因座的形态学和系统发育证据——热休克蛋白90(HSP90)、翻译延伸因子1-α(TEF1-α)、RNA聚合酶II(RPB2)以及核糖体DNA的5.8S和大亚基(LSU)。对挪威、瑞典和丹麦较大的大学真菌标本馆中所有名为[该属名称]的标本进行了检查并进行条形码编码,在[具体情境]中使用部分[基因名称]和/或[另一基因名称]作为优先的二级条形码。在三年(2015 - 2018年)内收集了额外的新鲜标本,以获取有助于物种鉴别的形态学数据。该[该属名称]物种集合由七个系统发育上不同的物种组成,嵌套在三个不同的谱系中,[物种名称1]和[物种名称2]在/高山-革质谱系中,[物种名称3]在/高山-南费尔德蒂谱系中,以及[物种名称4]作为/高山-南费尔德蒂谱系的一个支持较弱的姐妹类群。在这七个物种中,核糖体基因座在进化速率上表现出显著差异,这表明仅使用这些区域来界定[该属名称]物种时需谨慎。总共,496份可用真菌标本中的469份成功进行了条形码编码。