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Viperin:一种古老的 radical SAM 酶,在现代细胞代谢和先天免疫中找到了自己的位置。

Viperin: An ancient radical SAM enzyme finds its place in modern cellular metabolism and innate immunity.

机构信息

Department of Biology, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA.

Department of Chemistry, University of Michigan, Ann Arbor, Michigan, USA

出版信息

J Biol Chem. 2020 Aug 14;295(33):11513-11528. doi: 10.1074/jbc.REV120.012784. Epub 2020 Jun 16.

DOI:10.1074/jbc.REV120.012784
PMID:32546482
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7450102/
Abstract

Viperin plays an important and multifaceted role in the innate immune response to viral infection. Viperin is also notable as one of very few radical SAM-dependent enzymes present in higher animals; however, the enzyme appears broadly conserved across all kingdoms of life, which suggests that it represents an ancient defense mechanism against viral infections. Although viperin was discovered some 20 years ago, only recently was the enzyme's structure determined and its catalytic activity elucidated. The enzyme converts CTP to 3'-deoxy-3',4'-didehydro-CTP, which functions as novel chain-terminating antiviral nucleotide when misincorporated by viral RNA-dependent RNA polymerases. Moreover, in higher animals, viperin interacts with numerous other host and viral proteins, and it is apparent that this complex network of interactions constitutes another important aspect of the protein's antiviral activity. An emerging theme is that viperin appears to facilitate ubiquitin-dependent proteasomal degradation of some of the proteins it interacts with. Viperin-targeted protein degradation contributes to the antiviral response either by down-regulating various metabolic pathways important for viral replication or by directly targeting viral proteins for degradation. Here, we review recent advances in our understanding of the structure and catalytic activity of viperin, together with studies investigating the interactions between viperin and its target proteins. These studies have provided detailed insights into the biochemical processes underpinning this unusual enzyme's wide-ranging antiviral activity. We also highlight recent intriguing reports that implicate a broader role for viperin in regulating nonpathological cellular processes, including thermogenesis and protein secretion.

摘要

抗病毒蛋白(Viperin)在先天免疫应对病毒感染中发挥着重要而多方面的作用。作为高等动物中极少数存在的依赖于自由基 S-腺苷甲硫氨酸(SAM)的酶之一,抗病毒蛋白也值得注意;然而,该酶在所有生命领域中都广泛保守,这表明它代表了一种古老的抗病毒感染防御机制。尽管抗病毒蛋白在 20 年前就被发现,但直到最近才确定了该酶的结构并阐明了其催化活性。该酶将 CTP 转化为 3'-脱氧-3'、4'-二脱氢-CTP,当被病毒 RNA 依赖性 RNA 聚合酶错误掺入时,该物质充当新型链终止抗病毒核苷酸。此外,在高等动物中,抗病毒蛋白与许多其他宿主和病毒蛋白相互作用,显然,这种复杂的相互作用网络构成了该蛋白抗病毒活性的另一个重要方面。一个新兴主题是,抗病毒蛋白似乎促进了与其相互作用的一些蛋白的泛素依赖性蛋白酶体降解。抗病毒蛋白靶向的蛋白降解通过下调对病毒复制重要的各种代谢途径,或者通过直接靶向病毒蛋白进行降解,从而有助于抗病毒反应。在这里,我们综述了最近在抗病毒蛋白的结构和催化活性方面的理解进展,以及研究抗病毒蛋白与其靶蛋白之间相互作用的研究进展。这些研究为该不寻常酶的广泛抗病毒活性的生化过程提供了详细的见解。我们还强调了最近引人关注的报告,这些报告表明抗病毒蛋白在调节非病理性细胞过程(包括产热和蛋白质分泌)方面发挥着更广泛的作用。

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Viperin: An ancient radical SAM enzyme finds its place in modern cellular metabolism and innate immunity.Viperin:一种古老的 radical SAM 酶,在现代细胞代谢和先天免疫中找到了自己的位置。
J Biol Chem. 2020 Aug 14;295(33):11513-11528. doi: 10.1074/jbc.REV120.012784. Epub 2020 Jun 16.
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本文引用的文献

1
Viperin binds STING and enhances the type-I interferon response following dsDNA detection.Viperin 结合 STING 并增强 dsDNA 检测后的 I 型干扰素反应。
Immunol Cell Biol. 2021 Apr;99(4):373-391. doi: 10.1111/imcb.12420. Epub 2020 Nov 22.
2
ddhCTP produced by the radical-SAM activity of RSAD2 (viperin) inhibits the NAD -dependent activity of enzymes to modulate metabolism.ddhCTP 由 RSAD2( viperin)的激进-SAM 活性产生,抑制 NAD 依赖性酶的活性以调节代谢。
FEBS Lett. 2020 May;594(10):1631-1644. doi: 10.1002/1873-3468.13778. Epub 2020 Apr 20.
3
Viperin, through its radical-SAM activity, depletes cellular nucleotide pools and interferes with mitochondrial metabolism to inhibit viral replication.Viperin 通过其自由基-SAM 活性耗竭细胞核苷酸池并干扰线粒体代谢以抑制病毒复制。
FEBS Lett. 2020 May;594(10):1624-1630. doi: 10.1002/1873-3468.13761. Epub 2020 Mar 2.
4
Targeting viperin to the mitochondrion inhibits the thiolase activity of the trifunctional enzyme complex.靶向 viperin 至线粒体可抑制三功能酶复合物的硫解酶活性。
J Biol Chem. 2020 Feb 28;295(9):2839-2849. doi: 10.1074/jbc.RA119.011526. Epub 2020 Jan 24.
5
Interactions between Viperin, Vesicle-Associated Membrane Protein A, and Hepatitis C Virus Protein NS5A Modulate Viperin Activity and NS5A Degradation.蛇连蛋白、囊泡相关膜蛋白 A 与丙型肝炎病毒蛋白 NS5A 之间的相互作用调节蛇连蛋白的活性和 NS5A 的降解。
Biochemistry. 2020 Feb 18;59(6):780-789. doi: 10.1021/acs.biochem.9b01090. Epub 2020 Jan 30.
6
Mechanism of Diol Dehydration by a Promiscuous Radical-SAM Enzyme Homologue of the Antiviral Enzyme Viperin (RSAD2).抗病毒酶 viperin(RSAD2)的多功能自由基-SAM 酶类似物催化二醇脱水的机制。
Chembiochem. 2020 Jun 2;21(11):1605-1612. doi: 10.1002/cbic.201900776. Epub 2020 Feb 27.
7
The Interaction Mechanism Between Herpes Simplex Virus 1 Glycoprotein D and Host Antiviral Protein Viperin.单纯疱疹病毒 1 糖蛋白 D 与宿主抗病毒蛋白 viperin 的相互作用机制。
Front Immunol. 2019 Dec 11;10:2810. doi: 10.3389/fimmu.2019.02810. eCollection 2019.
8
Structural Basis of the Substrate Selectivity of Viperin.蛇形蛋白的底物选择性的结构基础。
Biochemistry. 2020 Feb 11;59(5):652-662. doi: 10.1021/acs.biochem.9b00741. Epub 2020 Jan 16.
9
Targeting UBE4A Revives Viperin Protein in Epithelium to Enhance Host Antiviral Defense.靶向泛素连接酶E4A(UBE4A)可恢复上皮细胞中的蝰蛇毒蛋白(Viperin),从而增强宿主的抗病毒防御能力。
Mol Cell. 2020 Feb 20;77(4):734-747.e7. doi: 10.1016/j.molcel.2019.11.003. Epub 2019 Dec 4.
10
Viperin inhibits classical swine fever virus replication by interacting with viral nonstructural 5A protein.Viperin 通过与病毒非结构蛋白 5A 相互作用抑制经典猪瘟病毒复制。
J Med Virol. 2020 Feb;92(2):149-160. doi: 10.1002/jmv.25595. Epub 2019 Sep 26.