Soil Ecology Lab, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China.
Soil Ecology Lab, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China.
Sci Total Environ. 2020 Oct 20;740:140008. doi: 10.1016/j.scitotenv.2020.140008. Epub 2020 Jun 12.
Increasing evidence demonstrated the critical role the earthworm gut played in sustaining earthworm's metabolism and transformation of nutrients and pollutants in the environment. Being rich in nutrients, the earthworm gut is favorable for the colonization of (facultative) anaerobic bacteria, which bridge the host earthworm gut with adjacent terrestrial environment. Therefore, the status quo of earthworm gut research was primarily reviewed in this work. It was found that most studies focused on the bacterial composition and diversity of the earthworm gut, and their potential application in nutrient element and pollutant transformation, such as nitrification, methanogens, heavy metal detoxification, etc. Yet limited information was available about the specific mechanism of intestinal bacteria in nutrient and pollutant transformation. Therefore, in this work we highlighted the current problems and concluded the future prospect of worm's intestinal bacteria research. On one hand, high throughput sequencing and bioinformatics tools are critical to break the bottleneck in the intestinal bacteria research via clarifying the molecular mechanism involved in the transformation processes described above. In addition, a global dataset concerning worm gut bacteria will be needed to provide comprehensive information about intestinal bacteria pool, and act as a communication platform to further encourage the progress of worm gut research.
越来越多的证据表明,蚯蚓肠道在维持蚯蚓新陈代谢和环境中养分及污染物转化方面起着关键作用。由于富含营养物质,蚯蚓肠道有利于兼性厌氧菌的定植,这些细菌将蚯蚓肠道与相邻的陆地环境联系起来。因此,本工作主要综述了蚯蚓肠道研究的现状。研究发现,大多数研究集中于蚯蚓肠道的细菌组成和多样性,及其在养分元素和污染物转化方面的潜在应用,如硝化作用、产甲烷菌、重金属解毒等。然而,关于肠道细菌在养分和污染物转化中的具体作用机制的信息有限。因此,在本工作中,我们强调了当前的问题,并总结了肠道细菌研究的未来前景。一方面,高通量测序和生物信息学工具对于阐明上述转化过程中涉及的分子机制,突破肠道细菌研究的瓶颈至关重要。此外,需要建立一个关于蚯蚓肠道细菌的全球数据集,提供有关肠道细菌库的全面信息,并作为一个交流平台,进一步促进蚯蚓肠道研究的进展。